KEGG   Mangifera indica (mango): 123213001
Entry
123213001         CDS       T07684                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
minc  Mangifera indica (mango)
Pathway
minc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123213001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123213001
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     123213001
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     123213001
SSDB
Other DBs
NCBI-GeneID: 123213001
NCBI-ProteinID: XP_044488237
LinkDB
Position
4:complement(15985716..15992267)
AA seq 797 aa
MERPGDKDFHLFAHYSSSSSSSTSTGNALFDASQYEFFGQNIGEEVELRGLEDDRDDAPV
FGSVDDEYHLFDKGDGFGAIPDVDDMTTTFAKLNRVVAGPRNPGVIGDRSGSFSRESSSA
TDWAQDGEFGSWFDQQIFDTENSEEGKRWSSQPQSSSARFLESESKPLYRTSTYPQEQPL
HHFSSEPILVPNSSFTSFPPPGSTSQHASPCHLNIPSAGGSQSPFSAPNLSPLSNPNNRQ
AGLSHGLHGGGSLSQLTSPGVSLKNRPQNHWVSRAGLLHGDHSSLIHNILQQQLAYQNST
MSPQLVSAQQHLQQQRLHHQVQPSLARFAALQSQLYSSHPSLKLMHGLSDIREQKPKASQ
RGRHSVRHSQGSENSSQKTDNGWIQFRSKYMTADEIESILKMQHVATHSSDPYIDDYYHQ
ARLAKKSSGLRMKNHFFPSHLKELPSRNRNSVEHHLHADAHGRIPLSSIRRLRPLLDVEP
TSGLGDETGEQKASEKSLEQEPMLAARITIEDGLCLLLDIDDIDRFLQFGQPQDGGAQLR
QKRQILLEGLAASLQLVDPFGKSGQTVGLAMKDDIVFLRLVSLAKGRQLFIKFLQLSFPG
SELTRIVCMAIFRHLRFLFGGLPSDPSAALTTTNLAKTVCACVNGMDLRALSACLIAVVC
SSEQPPLRPLGSPAGDCATVILISVLERASELQSHAAGSIRNLDLWHASFDSFFDLLTNY
CMSKYATIKQSQLSTEVKDSDAIKREMPRELLRASLPHTNEEQLNSLRNFANQCEPNAGS
IACASRGGQIISESVRG
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggagagaccgggtgacaaagatttccatctcttcgctcactactcctcctcctcctcc
tcctccacctccactggaaatgcactatttgatgcatcacaatatgaattttttggtcaa
aatattggggaggaagtggaattgaggggactggaggatgatcgagatgacgctcctgtg
tttggatctgttgacgatgagtatcatttgtttgataaaggagatggttttggagcaata
cctgatgtggatgatatgacgactacttttgcaaagttgaacagagttgtcgcaggacca
agaaatccaggtgtcattggtgacagatctggatcattttcaagggagagttcatctgct
actgactgggcacaagatggagaatttgggagctggtttgatcagcaaatttttgatact
gaaaattctgaagaaggaaagagatggtcatcacaaccacaatcttcttctgctcgtttt
ctggaatcagaatcaaaacccttgtacagaacatccacttatccccaggagcaaccgctg
catcacttctctagtgaaccaattcttgtgcccaattcaagtttcacgtcatttcctcct
cctggtagtacatctcagcacgcttcaccatgtcatctgaatattccttctgctggtggc
tctcagtcacccttctctgcaccaaatctttctcctctatccaaccctaacaatcgtcag
gctggcttatctcatgggttacatggtggtggaagtttgtctcagttgacatctcctggt
gtttctcttaaaaaccggccacaaaatcactgggttagtcgtgcaggcttattgcatgga
gaccactctagtctcatacacaacatattgcaacaacagttagcctaccaaaatagcaca
atgtctccacaattagtgtcagcgcagcaacatctacaacagcagagattgcaccatcaa
gttcaaccatctttggcccgctttgcagctttgcaatcgcaactatacagttcacatcct
tcactcaaattgatgcatggattgtctgatattagggagcaaaagccaaaagcttctcaa
agaggcagacatagtgtgcgccattcccaaggctctgagaatagtagccagaagactgat
aacgggtggatacaattcaggtccaagtatatgacagctgacgagatagagagtattctt
aaaatgcagcacgtggcaacgcatagcagtgatccatacatagatgattattaccaccaa
gctcggcttgcaaaaaaatcttctggattgaggatgaaaaatcattttttcccttcacac
ctgaaggagctgccatctcgaaaccgcaacagtgtggagcatcaccttcacgctgatgct
catgggagaattcccctatcttccatacgtaggctgcgtccgctccttgatgttgaacct
acttctggtcttggtgatgaaactggtgaacaaaaagcctctgagaagtctctggaacag
gagccaatgctggcagctagaatcaccattgaagatggtctttgtcttcttcttgatatt
gatgacattgaccggttcctacagtttggtcagcctcaggatggtggggctcagcttagg
cagaagcggcagatactgctagaaggattggcagcctcacttcagcttgttgatccattt
gggaaaagtggccagacagttgggctagccatgaaggatgatattgtgtttctaaggttg
gtttctcttgctaaaggtcgacagcttttcatcaaatttcttcagctttcattccctggc
agtgagctcacccgaatcgtgtgtatggctattttccgtcatttgaggtttttatttggt
ggccttccttctgatccctcagcagctctgacaactactaatcttgcaaagacagtttgt
gcatgtgttaatggcatggatcttcgtgcacttagtgcatgccttattgcagttgtttgt
tcctcagagcagccaccgctccgccctcttggcagcccggcgggggattgtgccactgtt
attttaatatcagttcttgaaagagcaagtgaactgcaatcccatgctgctggtagcata
cgtaaccttgacctatggcatgcttcatttgacagtttttttgaccttcttaccaattat
tgcatgagtaagtatgcaactataaagcaatcccagttgagcacagaagtaaaagattca
gatgctataaagcgggaaatgcccagggagcttctccgtgctagtctgcctcacactaat
gaggaacagctgaattctttaagaaattttgccaaccaatgcgagcccaatgcagggtct
attgcctgtgctagtcgtggtggtcaaataatctctgagtcagtgcgaggttaa

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