Mangifera indica (mango): 123213004
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Entry
123213004 CDS
T07684
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123213004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123213004
Spliceosome [BR:
minc03041
]
Complex A
U1 snRNP components
U1 related factors
123213004
Complex B
123213004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
PA-IIL
Motif
Other DBs
NCBI-GeneID:
123213004
NCBI-ProteinID:
XP_044488239
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All DBs
Position
4:16944849..16950963
Genome browser
AA seq
938 aa
AA seq
DB search
MADSPSSPANIEQNSKQPESDNPFIQPDQSSTSVPPQEQQSATPNPNSNQVSLPPPIQSY
VPPQQVSVPPTAPSYRPVTMPAVPQFSPVQNFQNTAVQPPGVGVSGSVAVTMAPPMMPYH
VVPGQLPNPALRPYAPVPNGYGVVHAPALGLPRYPAPYPAMVRPVFPPRPPGPIGVIPAV
ARPPVPGIPGVRPIITPVIRPAGFPVGTPAEKPETTVYVGKIASTADNDFMLSLLQVCGP
VKSWKRPQHPSNGTLKGFGFCEFESAEGVLRALRLLSKFNVDGQELMLNVTQATKDYLER
YVEKKTENTKKLKETHEDGAEKEDGSVQGVEKKESPKASEDLKDSETGDKENHDYSNFGI
VTDEDREMDQEGSKKLKSMIEERLKANPLPPPPSQSAVDDSGVSHSEVPAKNRDGDSDVD
ILRNDVAADKIEDETASDSKATSEHERPETSSPDRRTYDRRSRDRDRERDLKREKEREID
RYEREAERERVRKEREQRRKIEDAEREYERCLKDWEYREREKEKERQYEKERAKERERKR
KKEILYDEEDEDDDSRKRWRRSVLEDKKRKRLREKEDDFMDKIKEEEEIAEAKKRAEEEQ
LQQHQRDALKLLSGHEVNGTKKPALAEEYGVETKYKTAVEQDYVGDSINEKHLAGDEVLQ
NGTGEESMNASVSALDMRQSSNTLARKLGFGLVGSGKRAAVPSVFHEEEDDDAQKEKKMR
PLVPIDYSTEELQAAQPIVSGANQPNLAAAAEFAKHISNVNSKEEKLDSERERSRRSHDR
SGQREKDRSGEDNWRTRDENKGKIFDRDRDREHGLDKVKTPDNKKLLDAKQLIDMIPKTK
EELFSHEINWAVYDEHELHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLE
LLQTILDDEAEMFVLKMWRMLIFEIKKVETGLAVRSRS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcgccttcgtctccggcaaacatagaacaaaatagtaagcaacccgagtcc
gataatccatttattcaacccgatcaatcatctacttcggtaccaccgcaagagcaacaa
tcagcgacgccaaacccaaatagtaatcaggtgtcactgcctccaccgatccagtcttat
gttcctccacagcaagtatcggtgcctccgacggcaccgtcgtatcgtccggtgacgatg
ccggcggtgccgcagttctctccggttcagaatttccaaaacactgccgtacagccgccg
ggcgtgggcgttagtggtagcgttgcggttaccatggcgccgccaatgatgccgtatcat
gttgtcccaggccagcttccgaatccagcgcttaggccttatgcaccagtgccgaacgga
tatggtgtcgttcatgctcctgctctgggtcttcctcggtatcctgctccatacccagct
atggttcggcctgtatttcctccacggcctccaggacctattggagtgattccagcagtg
gcacggccccctgttccggggattcctggtgttcgcccaattattacaccagttatcagg
ccagctggttttcctgttggtacaccagcagagaaacctgaaaccactgtttatgttggc
aagatagcatcaactgcagataatgattttatgctttctcttcttcaggtatgtggacct
gtcaagagctggaaacgtcctcagcatccttcaaacgggacacttaaaggctttgggttc
tgtgaatttgagtctgctgaaggggttcttcgtgcattacgattactgagtaaatttaat
gttgatgggcaagaactaatgttaaatgttactcaagcaacaaaagattatctggagcga
tatgttgagaagaaaactgaaaacacaaagaaactcaaggaaactcatgaagatggggct
gaaaaagaggatggaagtgtgcaaggggttgagaaaaaagagtctcccaaagcttctgaa
gacttgaaggacagtgaaactggggacaaagagaatcacgattattccaactttgggatt
gtgactgatgaggatagggaaatggaccaagagggttcaaagaagcttaaaagcatgatt
gaagagaggttaaaggccaatcctctgcctccaccccctagtcaatcagctgttgatgat
tctggggtttcacactcagaagtgccagctaaaaacagggatggagactctgatgtggat
atattgagaaatgatgtagctgcagataaaattgaggatgagacagctagtgattccaaa
gcaactagtgagcacgagaggcctgagacgagctcacctgataggaggacatatgataga
agaagtagagatagagacagagagcgagatctaaaacgagaaaaggaacgggaaattgat
agatacgaaagggaagctgagcgagaacgtgttaggaaagagagagagcaaagaaggaag
attgaggatgctgagcgtgagtatgaaaggtgtcttaaagattgggagtatagggaaaga
gaaaaagagaaagagaggcagtatgagaaggagagggcaaaagagagggaacgcaaacgg
aagaaagaaattctttatgatgaagaagatgaagatgatgattcacggaaaagatggcgt
aggagtgtgttagaagacaagaaaaggaaaaggctaagagaaaaggaggatgatttcatg
gacaaaattaaggaagaggaagaaattgctgaggctaagaagagggctgaggaggaacag
ctgcagcagcaccaaagagatgcattgaagcttttgtctgggcatgaagtaaatggaact
aaaaaacctgcattggctgaagaatatggtgttgaaaccaaatataaaactgctgttgag
caggattatgtgggtgattccattaatgaaaagcatttagcaggtgatgaagttttacaa
aatggtactggtgaagaatcaatgaatgcatctgtttctgcattggatatgcggcagagc
agtaataccctggcaagaaagttaggttttggtctcgttggctctggcaaacgagctgct
gtcccttctgtcttccatgaagaggaggatgatgatgcacagaaggagaagaagatgaga
cccctggttcccattgattactccactgaggagctgcaggcagcccaacctattgtttcc
ggagcaaaccagccaaatttggcagcggcggcagaatttgcaaagcacatttcaaatgtt
aattccaaagaagagaagcttgattctgaaagagaaagaagcaggcgttctcatgatagg
tcaggccagcgtgagaaggaccggagtggtgaggataattggcgcacaagggatgagaac
aaaggtaagatttttgatcgtgatagagatcgggagcatgggttagataaggtgaagaca
ccagataacaaaaaacttttagatgctaaacaattgatcgatatgattccaaagacaaaa
gaggagttgttttcgcatgagataaattgggctgtttatgacgagcatgagctgcacgag
agaatgaggccgtggatttcaaagaagataacggagtttttgggagaagaagaaaccact
ctggtagactatattgtatccagtactcaagaacatgtgaaggcttctcaaatgctagag
ttactgcaaactattttagatgatgaagctgaaatgtttgtgctcaagatgtggaggatg
cttatctttgaaattaagaaggtagagacaggtctagcggtgaggtcaagatcttga
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