KEGG   Mangifera indica (mango): 123214002
Entry
123214002         CDS       T07684                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
minc  Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:minc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:minc04812]
    123214002
Cytoskeleton proteins [BR:minc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     123214002
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Katanin_con80 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR41 WDR90_beta-prop_4th eIF2A Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_ACSF4 PAN2_N UxaC
Other DBs
NCBI-GeneID: 123214002
NCBI-ProteinID: XP_044489611
LinkDB
Position
4:complement(17593..27270)
AA seq 802 aa
MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSLEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
TLLCGLHESLKVLSWEPIRCHDGVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
TEPYAVGSVTRSNGHSESKSSLGGHLSVLNENTGKAGLGRLSVSQNSDPLVKETKSLGRL
SASQNSDPAKESRIMSSTGSVPSTPQRVNLNTCPKTSVACSVTAPIATVPKRNSTKVNST
SNVSVLNKSDIVPVIVPRTNTRFEQAAESRKEVDIVGRTMPFSLQSKTADLHKFPKSGYE
VDQPTLPVFSETTGSKASELNSIADRSTFPAAKGSVHGVSAAEGNMKDDRFIASGKSESM
SMSESTAGYQDERYDNLGNKSTRDAFPVEKRGRMHSIVMNWEQRGRSPNYEAVSSSISRG
TVSTGSMPPLNVLNQRGYTPSVEKEMVYAIDEDATADVMEPHDQFVSSMQSRLAKLQVVS
RYWARNDYKGAISAVQKMADHAVLADVMSIVTDKIDIVTLDICTCLIPLLSGLLESDMDR
HLSVSLDMLLKLVRIFGSMIYSTLSASTSVGVDIEAEQRMERCNLCFIELEKVKHCLPTL
TRRGGSVAKSAQELSLALQEVS
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgactactaagcgcgcttataagctacaggaatttgtagcacattcttctaccgtcaat
tgtctcaagattggaaggaagtcatcgagggttttggtcactggaggtgaagatcacaag
gtcaatctctgggcaattggtaaacccaatgccattctgagtctgtctggacatacaagt
ggaattgattctgtaagctttgattctttggaagttttagtagctgctggagcggcaagt
ggtacaatcaagctttgggatttagaagaggctaagattgttcgcacacttactggtcac
agatccaactgcatatctgtggacttccatccatttggggaattctttgcatctggctct
cttgacacgaatcttaagatatgggatattagaaagaagggatgcatccacacttacaag
ggccatacccgaggggtgaatgccatcagatttactccagatggtcgttgggttgtatct
ggaggagaggacaatactgttaagctatgggatctcactgctggaaagctgttgcatgac
ttcaaatgtcatgaaggtcaggttcagtgcattgattttcatcctcatgaatttctgctt
gcaacaggttcagctgataggactgtgaaattttgggaccttgaaacatttgagctaatt
ggttcagctggccctgagaccactggagtgcgctgtttgacctttaatccagatgggagg
accttgctttgtggattgcatgaaagtctgaaggttctctcctgggaaccaataagatgt
catgatggtgtggatgtgggatggtcaagattgtcagatcttaacgttcatgagggcaaa
ctcctcggctgctcatataatcaaagttgtgtgggagtgtgggttgtagacatctcgcgc
acagagccatatgctgttggcagtgttacccgttcaaatggccattcagaatctaaatct
agtttaggtgggcatttatcagtactaaatgagaacactggaaaggctggtctgggaagg
ttatctgtttcacaaaattcggatcccttggtgaaggaaacaaaatcacttggaaggttg
tctgcttctcaaaattcagatcctgctaaggagtcaagaataatgtcatccacaggaagt
gtacctagtacccctcaaagggtcaatttaaatacatgtccaaagacaagtgtggcctgt
tctgtgacagctcctattgcaacagtccctaagaggaactctacaaaggtcaactcaaca
tccaatgtttcagtcttgaacaagtctgatattgtacccgtaattgttcctagaacaaat
actaggtttgagcaagcagctgaatccagaaaagaagttgacattgttggaagaacaatg
ccattttctttgcaatctaagacagctgatctccataagtttccaaagagtggatatgag
gttgaccaaccaactctccctgttttctctgaaaccacgggctccaaggcttctgaattg
aatagcattgcagataggagtaccttccctgcagctaaaggttcagtccatggagtgtct
gcagctgaagggaacatgaaggatgataggtttatcgcatctggtaagagtgaatcaatg
tcaatgtctgagtctactgctggctaccaggatgaaagatatgataatttgggcaataaa
tcaaccagagatgcttttccagtggaaaaaagaggaagaatgcattcaattgtcatgaat
tgggagcaaagaggaagatcccctaactatgaggcagtgagttcaagtatttcccgaggg
acagtatctactggaagtatgcctccgttaaatgtgcttaatcagagaggatatactcca
tctgttgaaaaagaaatggtttatgctattgatgaggatgctactgcagatgtaatggaa
ccgcacgatcagtttgtcagctctatgcagtctcgtttggctaagttacaggtagtttct
agatactgggcaaggaacgattacaagggggccattagtgctgtgcaaaagatggctgac
catgctgtccttgctgatgtaatgagcattgtgacagataaaattgacatagtgacgttg
gatatttgcacttgtcttatccctcttctttcaggtcttcttgaaagtgacatggatagg
catttaagtgtctctctggatatgctgcttaagcttgttagaatatttggttcgatgatc
tattcaacattgtcagcatcaacatctgttggcgttgatatcgaggctgagcaaaggatg
gaacgctgcaatctctgctttatagagctggaaaaagtcaagcactgcttgccaactctg
accagaagagggggttctgtggcaaaatcggctcaagaattgagtttagcactccaagaa
gtttcatga

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