Mangifera indica (mango): 123214343
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Entry
123214343 CDS
T07684
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
minc
Mangifera indica (mango)
Pathway
minc00040
Pentose and glucuronate interconversions
minc01100
Metabolic pathways
Module
minc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123214343
Enzymes [BR:
minc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
123214343
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123214343
NCBI-ProteinID:
XP_044490025
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Position
4:complement(16675711..16678019)
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AA seq
428 aa
AA seq
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MKDNGSSADSGYPGPSPVPVPPYGPNLTRSKIFDILSFGAKGDGVCDDSDAFQAAWKAAC
KVPGATLEIPSEFKFLIKPITLQGPCMPQLVLQIDGILLAPAEVGSWPISSLFQWLNFKW
VQNFTIQGTGTVDGQGPQWWTVSSLYYTQKKLKNILGLKPTAMRFYASYNVTVRDIKIIN
SPQCHLKFDNSRGIRVDNIKISSPENSPNTDGIHLQNTQEVEIQHSDIGCGDDCVSIQTG
CSNIYIHHINCGPGHGISLGSLGKDRSVGCISDIAVEKISVQNTLAGVRIKTWQGGIGSV
KNVSFSNIQVSNVKFPIIIDQYYCDKHFCKNQTGAVAISGVKYNQIIGTYSVQPIYLACS
EDIPCTDVDLIHIQLKPSRRYGGSHQGLCWNSYGISKAPLVPSSIDYCLRRDSGSIVKRI
ARFLEHVC
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataatggaagctctgcggattcaggatatcctggaccttcaccagtccctgtt
cctccttatggtccgaatcttactaggtcaaaaattttcgacattttgtcatttggagct
aagggggatggagtctgtgatgattcagacgcttttcaagcagcatggaaagctgcctgc
aaggtgcctggtgctacgttagaaatcccatcggagtttaagttcctcatcaagcccata
actctgcaagggccgtgcatgcctcaattagttcttcagatagatggaatcctcttggca
cctgcagaagtaggctcatggccaatatccagtttgtttcagtggttgaacttcaaatgg
gtccaaaacttcaccattcaaggcactggaactgttgatggtcaaggccctcagtggtgg
accgtctcttcgctctattacactcagaagaaactcaaaaacattctaggtttgaaacca
actgctatgagattttatgcaagctataatgtcacagttcgagatatcaaaatcataaac
agtcctcaatgccatttgaaatttgacaactccagggggatcagagtcgataatataaag
atttcttctcccgaaaacagcccaaacaccgacggcattcaccttcaaaatacacaagaa
gtggaaattcagcattctgatatcggatgcggagatgactgtgtatcaatacaaactggt
tgctcaaacatctacattcatcatatcaattgtggccccggtcatggtataagtttagga
agtcttgggaaagacaggagtgtaggctgcatttctgatatcgctgtggagaaaatctcg
gtgcagaatacattagctggagttagaataaagacatggcaggggggtattggatccgtc
aagaacgtgtccttttccaatattcaagtctctaatgtgaagttccctataataattgat
caatattattgtgacaagcatttctgcaagaatcaaactggagcagtggcgatatctgga
gttaaatataatcagataattggaacttattctgtgcagccaatctatctagcatgtagc
gaggatattccatgcacagatgttgatctaatccatattcagttgaagccgtcccgcaga
tatggtggttcacaccagggtttgtgttggaattcttatggaatatcaaaggctcctttg
gttccttcaagtatcgactattgcttgagaagggatagtggttcaatagtgaaaagaata
gcaagatttcttgagcacgtgtgttag
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