Mangifera indica (mango): 123214439
Help
Entry
123214439 CDS
T07684
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123214439
Enzymes [BR:
minc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123214439
Spliceosome [BR:
minc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123214439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
DUF1308
Motif
Other DBs
NCBI-GeneID:
123214439
NCBI-ProteinID:
XP_044490134
LinkDB
All DBs
Position
4:17236503..17243557
Genome browser
AA seq
1181 aa
AA seq
DB search
MNSLSSISSLKTFSFFSLSTSKPSSSFKFHSLSQTLDFCILKQLSLPNLIQFQASYNGPK
SVISAGPKFSAADGEEEEEIDYNEDDDDDDEEEEVADEYDDISGGISDEFQQSEDEFETS
VDSTDTSTRRGEFKWQRVEKLCNEVKEFGDELIDVDELASVYDFRIDKFQRSAIEAFLSG
YSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRESFGDNNVGLL
TGDSAVNREAQILIMTTEILRNMLYQSVGMVSSESGLFKVDVIVLDEVHYLSDISRGTVW
EEIIIYCPKEVQIICLSATVANADELAGWIGQIHGQTELVTSSKRPVPLTWHFSTKNALL
PLLDEKGKHMNRKLSLNYLQVLASEGKSYRDDGSRRRNSRKRRGDMSSSNISASEQPKLS
KNDMNTIRRSQVPQVVDTLWHLRARDMLPAIWFIFNRRGCDAAVQYLEDCNLLDDCEVSE
VELALKRFRILYPDALRETAVKGLLKGVAAHHAGCLPIWKSFIEELFQKGLVKVVFATET
LAAGINMPARTAVISSLSKRIASGRIQLASNELLQMAGRAGRRGIDEMGHVVLVQTPYEG
AEECCKLLFAGVEPLVSQFTASYGMVLNLLAGAKVIHRSNESDNTKALQAGRTLEEARKL
VEQSFGNYVGSNVMLAAKEELAKIQKEIEMLTSEISDDAIDRKSKRLLSEAAYKEIVDLQ
EELKAEKRLRTELRRRMELKRFSALKGLLREFENGHLPFLCLQYKDSEGVEHSVPAVYLG
KLDSLDSPKLKNMVSSDDSFALNIVEIQTSGDEFETQDVESSYYVALGSDNSWYLFTEKW
VKTVYKIGFPNVALAQGDALPRETMRLLLDKGDMRWEKLAVSESGGLWCMEGSLETWSWS
LNVPVLNSLSEDDEVLHMSQEYHDAVENYKQQRTKVARLKKMIARTEAFKEYKKILDTVK
FTDEKIKRLKARSKRLLKRIEQIEPSGWKEFLRISNVIHEIRVLDINTLVIFPLGETAAA
IRGENELWLAMILRNKILLDLKPAQLAAVCSSLVSEGIKVRSWKNNSYIYEPSSTVINVI
NFLEDQRSSLLQLQEKHEVEIPCCLDSQFTGMVEAWASGLTWREMMMDCALDDGDLARLL
RRTIDLLAQIPKLPDVDPLLQKNAMAASDVMDRPPISELAG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaactctctctccagtatctcctctctgaaaacgttttcattcttctcgttgtcaaca
tcaaaaccttcctcttctttcaaatttcactctttatctcaaaccctagacttttgcatc
cttaaacagctttccttaccgaatttaattcaatttcaagcctcctacaatggcccaaag
tcagtcatctcggcagggcccaagttctcagctgccgatggcgaagaagaagaggaaata
gattataacgaagatgacgatgatgatgatgaagaagaagaagtcgccgacgaatatgac
gatatttctggtggaatctcggatgaattccaacaaagtgaagatgaattcgaaacttct
gtggactcaacagacacctcgactcggcgcggggagttcaagtggcagagagtagaaaag
ctgtgtaatgaagttaaagagttcggtgacgaattgattgacgttgacgaacttgcttct
gtttacgattttcgcatcgacaaatttcagcggtcggcaattgaagctttcttgagcggc
tattcagtggtggtttctgcgcccacaagcagtggaaaaactttgattgctgaagctgct
gcagttgccacagtagcgagaggacgccggatcttctataccaccccgcttaaggcattg
tctaatcagaagtttcgagagtttcgggagtcatttggtgataataatgttggtcttctt
acgggagattctgcagtcaaccgagaagctcagattttaattatgactactgagattttg
cgtaacatgttgtatcagagtgttgggatggtttcttctgagagtggactgttcaaggtt
gatgtgatagttttggatgaagttcattatttaagtgatatatctcggggtacagtgtgg
gaggagataattatttattgcccaaaagaagttcaaatcatatgcctgtcagcaacagtt
gcaaatgcagatgagttagctggctggattggtcagatacacggtcaaactgagttagtg
acatcatctaagcgaccagttcccttgacttggcacttctctaccaaaaatgctttatta
cctcttcttgatgagaaaggaaaacacatgaataggaagctgtcactcaattatttacaa
gttttggcttcagaaggtaaatcgtacagggacgatggatctagaagaaggaattccagg
aaacgcagaggtgacatgagcagcagtaacattagtgcctctgaacaacccaaactttca
aagaatgacatgaacacaattcgtcgttcacaggttcctcaagttgttgatacattatgg
caccttagggcaagggatatgctgccagcaatttggtttatttttaacagaagaggatgt
gatgcagcagtccaataccttgaagattgtaatttattagatgactgtgaggtgagtgaa
gttgaattggccttgaagaggtttcgcattctgtatcctgatgctctcagggagactgct
gtgaaaggacttctaaaaggggttgcagcacatcatgctggctgtcttcctatatggaaa
tcatttattgaagagctttttcagaaagggcttgttaaagttgtctttgctacagaaaca
cttgccgctggaatcaacatgcctgctaggacggctgttatttcgtctctcagcaaaagg
attgctagtggaaggatccaattagcctcaaatgaactacttcagatggcaggacgtgct
ggacgtagaggcattgatgaaatgggtcatgttgttctggttcagaccccttatgaaggt
gctgaagagtgctgtaagctattgtttgctggagttgaacctcttgtgtcacaattcact
gcttcttatggaatggtgctcaatcttcttgcgggtgcaaaagttattcatcgatcgaat
gaatcagataacacgaaagctttacaagcaggcaggactttggaagaagctaggaaatta
gttgagcaaagttttggaaactatgttggcagcaatgtaatgcttgctgcaaaagaggag
cttgctaaaatacagaaagagattgaaatgctgacctcagaaattagtgatgatgctata
gacaggaaaagtaagagacttttgtcagaggctgcatataaggagattgtggatctacag
gaagagttaaaggcagaaaaacgccttcgaactgaactacgtagaagaatggaattgaag
agattctctgctcttaaaggtcttttaagggaatttgaaaatggtcacttaccctttttg
tgcttacaatacaaggattctgaaggagttgaacactcggtccctgctgtatatttgggg
aagttagactcacttgatagtccaaaacttaagaacatggtttcttctgatgattctttt
gctctaaatatagtagagattcagacaagtggtgatgagtttgaaactcaagatgttgaa
tcatcttattatgtggctcttggttcagataactcttggtatttatttactgagaagtgg
gttaaaactgtatacaagataggctttcctaatgttgctttagcccagggagatgctttg
ccacgggagacaatgaggttacttctggataagggggatatgcgctgggaaaagcttgct
gtttctgaatctggtggtttatggtgcatggaaggatctttagagacatggtcttggagt
ttaaatgtgcctgttttgaatagtctttctgaagatgatgaagtgttacacatgtcacag
gagtaccatgatgctgttgaaaactacaagcaacaaagaaccaaagtagcacgtttaaag
aaaatgatagcacgcacagaagcctttaaagagtacaagaagatcttagacactgttaag
tttactgatgaaaagataaaacgcctgaaggctagatcaaagcgtttgctcaaaagaatt
gagcaaatagaaccatctggttggaaagagtttttgaggatcagcaatgtcatacatgaa
attagggtattggatattaatactcttgtaatttttccattgggtgaaactgcagctgca
attcgaggagaaaatgaactctggcttgcaatgattcttagaaacaaaattttgctagat
ttgaagcctgctcaacttgctgctgtatgttcaagtttagtctctgaagggatcaaagtc
cgttcttggaaaaataacagctacatatatgaaccttcttctactgttatcaatgtgatt
aattttttggaggaccagagaagttccctattgcaactgcaagaaaagcatgaggtagag
ataccttgttgtttagatagccaatttactggcatggtagaagcctgggcctctggtctg
acttggagggagatgatgatggattgtgccttggatgatggggatttggctcgcctattg
agacgaacaattgacctattggctcagattcctaagttgcctgatgtggatccactgcta
cagaagaatgcaatggctgcctctgatgtaatggatcgtccaccaataagtgagctagct
ggataa
DBGET
integrated database retrieval system
