Mangifera indica (mango): 123214448
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Entry
123214448 CDS
T07684
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123214448
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123214448
Surveillance factors
Other surveillance factors
123214448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
123214448
NCBI-ProteinID:
XP_044490150
LinkDB
All DBs
Position
4:complement(20324678..20332186)
Genome browser
AA seq
1590 aa
AA seq
DB search
MAEGKFDLPDDLFTSKPSDRPWTPKGAASGGNEDKVHLGILDDSKDHLTSESSIPLSPQW
LYAKPSETKMDVRGPTSVSLGNSTDSNLKDSWRLEGSEDKRDWRRSVTDGDNSRRWREEE
RETSLLGVRRDRRKVDRRNDNVSSRDTVDNRTLPSSDRWHDGNTRRDSKWSSRWGPEDKE
KETRTGKKTDAEKEKEDPHNDNQSFVSSNRSASERDTDARDKWRPRHRVDPHFTGSSSYR
AAPGFGLEGRVEGSNLGFTIGRGRSNVIGRVSSVGPIGAAHPHHSESARGKSGHLAETFC
YPRGKLLDNYRRQKTDPSFATVLSEMEELSPITQAAFIEPLAFVAPDPVEEAVLSDIWRG
KITNSGAVYNSLRQGRSTDFASGHEDLESTEGKKGVLPAVLDETVQTLQEAGNVACQFVN
NDTLKNYGLHVNVADGGEVNYEDHKSDIDGRFSTFSKSNGVSSAIGIDAACHHAENWQFE
DLTLNKQPPSDNIDSTAFDIRSKLPDDSSLLLDTASTQPKQGSDVQLLGSTEKDLSRDTP
PEQQILYYIDPQGVTQGPFLGADILSWFEQGFFGTDLPVRLADAPEGTPFQSLGEVWQHL
KDKDKNVSCVDPNSELEQFDSLGGNMEAALPVSAITGSTLVNGVNQPLPKFDSLSTQHLQ
SGLPELEAPLQLLHPEGQSIQDFAAQDEEILFPGRAGNTGYPIVKSSGRIHDSCVQPSHP
TESASSGIAIQNDDKLHPFGLLWSELEGTHTRPTNVPSGMRRAAPFSAMADPSLTEETRS
DIYRKNILADPIVYQDPMTAHHMRHMEQESNRFDLADQLLSKQLQQQQLQRRNMFPHTRL
NESVLEQLTNQNLIHQQQLANHPASDMEHLLTLHLQQQRQLELQHHQLQQQQQFHQQQKL
LQDQQQSQARQLLFEQLMHGQMPDPALGHSHIDPIRANNAFNQALLEQHLLHEMQQRSHH
PQKHFIPSLDQLVQMKLGQVPLQDKQREMFELMSRAQHGQMPALEHQILQDQMQARQLSV
GLRQQTKVQEGRHIDSIWPADEPDLFHRSLSGAHSSGFSPLDIYQQQQRSTHEEQLGQLE
RNLSLQEQLQQGLFEPGSLSFEPSLSLPAGASEMNLDTLNTMARHHGLDLKQSSSRMQSG
GHAGTFPSGIHPHILPHPLAPNQLNASHLDAVEGYRAENNGQLANQWVESQIQQFHINAE
QQRREPEVRMPSEDPSLWMPDRPHDDKSRQLLMELIHKRSGHHPAESLDMNMNGVPFGRR
SPSGVYSGSSSPSHHFNLHSGQEAGPNNSFTVGSYGSNSSDPQQVYVAGKQVSSFDSSEK
LWLRPESGAMSEGEPLLSSVNDGTRAIYADSNMIGQSSVNKEFSDVDAVKHGSKSEDMIK
GSIFEVQDGMAKQAGLATLDWVEIPTHPLSRHNSHVAGSDTGFYDSFTEDIPKDKVQVAS
RIQENILLRRPPVSRVSSSQEGLTDLISNPAMRGKVSPSTNGRQDPGGNLGSQGSDMASG
MKEMRFRHTSSCGDADVSEPSFIDTLKSNTKKNVVPDAHMTIGTLDPDGPQGGRGGKKKG
KKGRQIDPALLGFKVTSNRIMMGEIQRLDD
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaggcaagttcgatctacccgacgatctcttcacctctaaaccctccgatcgt
ccctggactcctaaaggggctgcgtcagggggaaatgaggataaggttcatttggggata
cttgatgattccaaagaccatttgacatcagaaagcagtattccattgtctccccagtgg
ctatatgctaaaccaagtgaaaccaagatggatgtgcgtggtccaacttctgtctctctt
ggaaactccactgattccaatctgaaggacagctggcgtttggaaggatctgaggacaaa
agggactggaggaggagtgttacagacggtgacaatagccgccgctggcgcgaagaggaa
agagaaactagcttacttggtgttagaagagatcgcaggaaagtagaccgtcgtaatgat
aatgtttcgtctagagatacagttgacaatagaaccttaccatcttctgatcgatggcat
gatggtaacacacgtcgtgatagcaaatggtcttctaggtggggtccggaagacaaagag
aaggaaacccgaactgggaagaaaacagatgcggagaaggagaaggaagatcctcacaat
gacaatcaatcttttgtaagtagcaaccgctcagcttctgaacgtgacacagatgctagg
gataaatggagacctcgccatagagtggatcctcattttactggttctagttcataccgt
gctgcgcctggatttggactcgaaggacgagtggagggttcaaatttgggatttactatt
ggacgaggaaggtcaaatgttattgggagggtttcatctgtaggccccattggtgctgca
catcctcaccatagtgaaagtgcccgagggaaatctggccatttagccgaaactttttgc
tatcccagggggaagcttcttgacaattatcgtaggcaaaagactgatccttcatttgct
actgtgctcagtgaaatggaggaattgtcccctattactcaagcagcttttattgaacca
ttggcttttgttgctcctgaccctgtagaggaggctgtccttagtgatatatggagggga
aagatcacaaatagtggggcagtatacaactcactgagacaagggagatcaactgatttt
gcttcaggtcatgaagacttggaatccactgagggaaagaagggagtcctccctgcagtt
cttgatgaaactgttcagacattgcaggaagctggaaatgttgcatgtcaatttgttaat
aatgataccttgaagaattatggtttacatgtgaatgtggcagatggaggagaggttaat
tatgaagatcacaaatcagatatagatggaaggttctcaactttctcaaaaagcaatggt
gtcagcagtgccataggcattgatgctgcttgtcatcatgctgaaaattggcaatttgag
gatttgactttgaataaacagcctccgtctgataacattgactctactgcttttgacatc
agatccaagcttcctgatgattcaagcttgctgttggatacagcatcgactcagcccaaa
cagggtagcgatgtgcagcttttgggaagtacggagaaagacttatcaagggatactcca
ccagagcaacaaattttgtactacattgatcctcaaggggtaactcagggaccatttctt
ggtgcagatattctttcatggtttgaacaaggttttttcgggacagacttacctgtccgc
ctggctgatgctcctgagggaacacctttccaaagtttgggtgaggtgtggcaacatctg
aaagataaagataagaatgtcagttgtgttgatccaaattctgagctggaacaatttgac
tctttgggaggaaatatggaggctgctttacctgtttcagcaattacaggttcaaccttg
gtaaatggcgtgaaccaacctctgcctaagtttgacagtctctcaactcaacatcttcag
tcaggattaccagagcttgaagctcctttacaattgctccatcctgaaggtcaaagcatt
caagatttcgctgcgcaagatgaagaaatcttgtttccaggaagagcagggaataccgga
tatcctattgtaaaatcttctgggaggattcatgatagttgtgtccagccatctcatcca
actgagtcagcaagttctggcattgcaattcaaaatgatgataagttgcacccttttggc
ctgctgtggtctgagcttgaaggaacccacacaagacctacaaatgtgccttctggcatg
agaagggctgctccattcagtgccatggctgatccaagtcttactgaagagacacggtca
gatatatatagaaaaaacatacttgctgaccccattgtgtatcaagatcctatgactgct
caccatatgcgacacatggaacaggaatccaaccgatttgatctagcagatcagcttttg
tctaaacaattgcagcaacagcagctccaacggcgaaatatgtttcctcatacacgcctg
aatgaatcagttttagaacagttgacaaatcagaatctgattcatcaacaacagttggcg
aatcatccagcttcagatatggaacatcttttgacccttcatctgcaacaacagcgtcag
ctggaactccaacatcatcaattgcagcaacagcagcaatttcatcaacaacaaaagctt
ttgcaggaccaacagcaatctcaagctcgacagttgctctttgagcagttgatgcatggt
caaatgcctgatcctgcccttgggcactcacatattgacccaataagagcgaacaatgct
ttcaatcaggctttattagagcagcaccttttacatgagatgcaacaacgttctcatcat
ccccaaaagcacttcattccttctttagatcagcttgtgcaaatgaaattgggtcaggtg
ccactgcaagataagcaaagagagatgtttgagttaatgtcacgtgctcaacatggacaa
atgccagcattggagcatcagattcttcaggaccagatgcaagcacggcagttatcagtg
ggattaaggcagcaaaccaaagtgcaggaagggaggcatattgattctatttggccggct
gatgagcctgatctgtttcataggagtttgtctggtgctcactcctcagggtttagccca
ctagatatttaccagcagcaacagaggtcaactcatgaggagcagctgggtcagcttgag
cggaatctgtcattacaagagcagctgcagcaaggactttttgagcctggttcactgtca
tttgagccgtccttgtctttgcctgctggtgcttcggagatgaatttggatacacttaat
actatggcacgtcatcatggtttggatttaaagcagtctagctcacgtatgcaatctggt
ggtcatgctgggacatttccttctggcattcaccctcatattttaccccaccctttagcc
ccaaaccagctcaatgcttcacatttggatgcagtggagggttacagggctgaaaacaat
gggcagctggcaaatcaatgggtggaatctcaaattcaacagtttcacattaatgctgag
cagcagagaagggagccagaagttagaatgccttctgaagatccaagtttatggatgcca
gataggcctcatgatgacaagtcaaggcaattgttaatggagctgatccataagagatca
ggtcatcaccctgctgagtcattggacatgaatatgaatggtgtaccctttggaaggagg
tcaccatctggagtctactctgggtcaagctctcccagtcaccatttcaatcttcattca
ggccaagaagcaggtccaaacaattcatttacagtaggatcttatggttctaattcctct
gaccctcagcaggtttatgtagctggcaagcaggttagcagttttgatagcagtgagaaa
ttatggttaagacctgaatctggagcaatgtctgagggagagccattattgtcaagtgtg
aatgatggtactcgggcaatttacgctgattctaacatgattggtcagtcttctgtaaac
aaagagttctccgatgttgatgcagtgaagcatggttccaaaagtgaagatatgattaag
ggttctatttttgaggttcaagatgggatggccaagcaagcaggtttggccactttggat
tgggtggaaattcccactcatcctcttagcagacataattcacatgttgctggtagtgat
acaggtttttatgattctttcacagaagatattcccaaggataaggtgcaggttgcatcc
aggattcaagaaaatattttgttgagacgtccaccagtctcacgtgtttcatcatcccag
gaaggattgactgatctcatctctaatcctgctatgagaggaaaagtttcacctagtact
aatgggaggcaagatcctgggggaaatcttggaagccaaggttcagacatggcatcaggg
atgaaagaaatgagatttcgccacacctcatcctgcggtgatgctgatgtttcagagcct
tcatttatagacacgttgaagagtaataccaagaaaaatgttgtgcctgacgcccacatg
acaatagggacattagatccagatggaccccaaggtggtcgtggtggtaaaaagaaaggt
aagaaagggaggcaaattgatcctgctctcctgggttttaaagttactagtaatcgcatc
atgatgggtgaaatccagcgcctagatgattag
DBGET
integrated database retrieval system
