Mangifera indica (mango): 123214480
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Entry
123214480 CDS
T07684
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123214480
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123214480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
123214480
NCBI-ProteinID:
XP_044490198
LinkDB
All DBs
Position
4:4276866..4288031
Genome browser
AA seq
730 aa
AA seq
DB search
MKREFVEISDDEWENHSFKPSRVLKIKTQTTKPPPSIESFAFKAENHHKKLDENLEDEDV
EEEGPVPVTINRGRRFIVDDDDEDQQSEGDFAELYEVKSSTEEDEMLEDYEHEEDDVVGK
ALQKCAKISAELKRELYGTSSTACDRYAEVEASSVRIVTQNDIDEACGDEDEDEDFQPVL
KPYQLVGVNFLLLLYRKGIGGAILADEMGLGKTIQAVTYLMLLKHLNNDPGPHLIVCPAS
VLENWERELKKWCPSFSILQYHGAARTAYSKELSSLAKAGLPPPFNVLLVCYSLFERHSV
QQKDDRKILKSWHWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLNE
LWSLLEFMMPDLFATEDVDLKKLLNAEDRNLIGRMKSILGPFILRRLKSDVMQQLVPKIQ
KVEYVIMEKQQDNAYREAIEEYRAASRARIAKLSKANLSNIVGVLPQRQISNYFVQFRKI
ANHPLLVRRIYSDDDVVRFAKKLRPMGAFGFECTLDRVIQELKSYNDFSIHQLLCSYGGA
DTKGILSDKHVMLSAKCRALAELLPSLKKGGHRVLIFSQWTSMLDILEWTLDVIGVTYRR
LDGSTQVSERQAIVDSFNSDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQA
EDRCHRIGQTKPVTIYRLVTKGTVDENVYEIAKRKLILDAAVLESGAEVANEGDTSDMTM
GEILASILMG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagaattcgtcgaaatctcggacgacgaatgggaaaatcattccttcaagccg
tctcgagtactcaagataaaaactcagacaacaaaacctcctccttcaatcgaatcgttc
gcttttaaagccgaaaatcaccacaaaaaattagacgaaaatcttgaggatgaagatgta
gaggaggagggacccgtgcccgtcacaatcaatcgtggccgtcgattcattgttgacgac
gacgatgaggatcagcagagcgaaggagattttgctgaactttatgaagtaaagtcttct
actgaagaggatgaaatgttagaagattatgaacatgaggaggatgatgtggttgggaaa
gctttgcaaaaatgtgctaaaatatcggcggagcttaaaagagagttatatggtacttct
agtaccgcttgtgatcgctacgcggaagttgaagcttcctcggttaggattgtgactcag
aatgatattgatgaagcatgtggggatgaggatgaggatgaggattttcagcctgttctc
aagccctatcagctggttggtgtcaattttcttctcttgttgtatcgaaagggcattggg
ggagccatattggcagatgagatgggtcttgggaagaccattcaggctgtgacatatttg
atgcttctaaagcacttgaataatgaccctggaccccacttaattgtatgtcctgcctct
gttttggaaaattgggagagagaacttaagaagtggtgtccatcattttctatactccaa
tatcatggggctgcacgaacagcctattcaaaagagttgagctctttggccaaagctgga
ttgcctcctccgtttaatgtgcttcttgtctgctattcactttttgaacgtcacagtgtg
cagcagaaagatgaccgtaaaattctgaaatcttggcattggagctgtgtgctgatggat
gaggctcatgctttgaaggataaaaacagctataggtggaagaacctaatgtcagttgct
cgaaatgcaaaccagcggctaatgcttacagggactccactacaaaatgatttaaatgag
ctctggtcattattggaattcatgatgcctgatctttttgctactgaggatgtagatttg
aagaaactactaaacgcagaagatagaaacttaataggtagaatgaagtccattttagga
ccattcatcttgagacgtttaaaatctgatgtaatgcaacaacttgtcccaaaaatacag
aaggttgagtatgttataatggaaaaacagcaggataatgcctatagagaagccatagag
gagtatcgggctgcatcacgagctcgtattgctaagctttctaaggctaatttgagtaat
attgttggagttcttcctcaacgtcagatttccaactattttgttcagttccgtaagatt
gcaaatcatcctttattagtgaggcgaatctactcagatgacgatgttgttcgatttgct
aaaaagttacgtcctatgggggcatttggatttgaatgtaccttggaccgagtaatacag
gagcttaagagctacaatgatttttccatacaccagcttttatgctcttatggcggtgct
gataccaagggaattctttcagacaaacatgttatgctttcagcaaaatgtcgggcatta
gctgaacttcttccctctctaaagaaaggtggccatcgggttttgatttttagccagtgg
acgtcaatgcttgatatcttagagtggactttggatgtgattggagttacttatagacga
cttgatggaagtactcaggtgtcagagcggcaggctatagttgattctttcaatagtgat
acttccatctttgcttgtttgctttccacaagagctggtggccaaggcttaaacttgact
ggtgctgatactgttgtcatccatgacatggatttcaatccacaaattgatcgacaggca
gaagatcgttgtcatcgtattggccaaacaaagcctgtcaccatatataggctggtaacc
aaggggacagttgatgagaatgtttatgagatagcaaaaaggaagctaattttggatgcc
gctgttcttgagtctggtgccgaggtagctaatgaaggtgacacatctgatatgactatg
ggagagatactggcgtctattctgatgggttag
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