Mangifera indica (mango): 123214545
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Entry
123214545 CDS
T07684
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123214545
03015 mRNA surveillance pathway
123214545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123214545
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123214545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
GNC1_N
Motif
Other DBs
NCBI-GeneID:
123214545
NCBI-ProteinID:
XP_044490310
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All DBs
Position
4:6618600..6626447
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AA seq
666 aa
AA seq
DB search
MGVIKLELRCPKSVEGIAVDPEPDWSFEALLSEINSLEVKLNVSSTPVLFAKTKSRGIPN
GKSVERKAGAFVMYLSDDEMDAEFTQGEEVYNQASVLVKRFGCDELYLSESDDSGDDKEL
EPYLMDEVGLAEGALVELTHEHQLGVKEEIRNLISTLEMELMSENEQSYSALARVQKYRD
MRREMDKKLDTQYQRKIAEALDNHLTAIQRDHELKSQIEERKIRSDAAYEEAKRKERALQ
EEKLRQEKMKAEAEAKIRVEEANKAALEAERRAAKKAAEREATEALERIMPAASQGEATR
RQMDGGSVILNYQSKGPVSDRITNSQSAGHILRAAESALKMEQKRWQKLTEIDEKNQALT
SSSSKDLSSHERHISRLIRQIRGTKDNVRTKASEIIKIFNNPLCPQSVSIATFAKKVVSH
CESPDNAAFACGYVIVLVTSQVPEVMDLLLGEFHRACIYTVPKHIVYLESAFESKDAYYK
SIGYREKDGKIESLEDFLRRLESYMRLYAALIQTEVQGVKNTHGLEEGWTWLARFLNAVP
ANIYTAVALHVFLQMAGFALFRKYKSQFMKMINIISDNFLNALRAREDSELKPVIVGIQS
YIEDKKFLEEPEGRTLQASLLSSTMVPDSEYQESYSGGGYHPEYQESYGRYQPEFHKTNS
RYQYYY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggagttattaagttggagcttcgctgtccgaaaagtgttgaaggaatcgcagtcgat
cccgagcctgattggagtttcgaagcgcttttgtctgagattaattcacttgaagtaaag
cttaatgtctcttcaactcctgtgcttttcgccaaaacaaaatcacgaggaattccaaat
gggaaaagtgttgaaagaaaagctggagcttttgttatgtatttatcagatgatgagatg
gatgccgaatttactcagggtgaggaggtttataatcaagcttcggtgttggtcaagcga
tttggctgtgatgagctttatctgagtgagagtgatgattctggtgatgacaaagaattg
gagccatacctgatggatgaagtgggattagctgaaggtgctttggttgagctaacccat
gagcaccagcttggagttaaggaggagattaggaacctgatttcaacattagagatggag
ctaatgagtgaaaatgaacagtcttactctgcacttgcccgagttcagaaatatagggac
atgagaagggaaatggataagaaacttgatactcaatatcagcgcaaaattgcagaagca
cttgataatcatttgactgccatccagcgagatcatgaacttaaatcacaaattgaagaa
agaaaaataagaagtgatgcagcttacgaagaggccaagaggaaggaaagggctcttcaa
gaggaaaaactacgtcaggagaaaatgaaagcggaagcagaagctaaaattagagttgag
gaagcaaacaaagcagctttagaagctgagaggagagcagcaaaaaaagctgcagagaga
gaagctactgaagccttggaaagaattatgcctgcagcatctcaaggtgaagctacaagg
cgccagatggatggtggttcagtgattttgaattatcaatccaagggacctgtatctgat
agaataacgaattcacaatcagcaggtcacatactcagagctgcggaaagtgcactaaag
atggagcagaaaagatggcaaaagcttacagagattgatgaaaagaatcaggcattgaca
tcgagctccagtaaggatctcagcagccatgaaaggcatatctccaggctgataaggcaa
ataaggggcacaaaagataatgtcagaacaaaggcaagtgaaattattaagattttcaac
aatcctctttgtcctcaatctgttagcattgcaacttttgcaaagaaggtcgtctcccat
tgtgaaagccctgataatgctgcttttgcttgtggctatgtcattgtcctggttacttca
caggtaccggaagtgatggatcttcttcttggtgagttccatagagcttgcatctacacc
gttccaaaacatatagtgtacttagagtctgcatttgaatctaaagatgcttactacaaa
agtattggatatcgagaaaaagatggaaaaattgagagtcttgaggattttttgagacga
ttggaatcctacatgagattgtatgctgcactaattcagacagaagtgcagggtgtaaag
aacacacatgggttggaagaaggttggacatggcttgcaagattcttaaatgctgtgcct
gcaaatatatacactgctgttgcattgcatgtattcctgcaaatggcaggttttgctctc
tttcgcaaatacaaatctcagtttatgaagatgatcaacataatctctgacaactttttg
aatgcgttgagggcacgagaagattcagagctgaagccagtgattgtggggattcaatcc
tatatagaagacaaaaagtttcttgaggaacctgaagggaggactttgcaggcttcctta
ctatcaagcacaatggttccagattcagaataccaagagtcttatagtggcggcgggtac
cacccagaataccaagagtcttatggtagataccagcctgaatttcacaagaccaatagt
agataccaatattattattaa
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