Mangifera indica (mango): 123214592
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Entry
123214592 CDS
T07684
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123214592
03009 Ribosome biogenesis [BR:
minc03009
]
123214592
Enzymes [BR:
minc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123214592
Spliceosome [BR:
minc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123214592
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
90S particles
Helicases
123214592
Pre-60S particles
123214592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
123214592
NCBI-ProteinID:
XP_044490394
LinkDB
All DBs
Position
4:15956570..15962486
Genome browser
AA seq
584 aa
AA seq
DB search
MAKEEKKKLTRKRKRSRTKRTEETVAEHEQAAQISDDEEELEQTEEEIEEVEKKEAEKYV
KYKKEKDERKDEDTEEEEEKRVKVKNRGGSGIMSTTSFESLGLSQHTFRAIQEMGFQFMT
QIQARAIPPLMVGKDVLGAARTGSGKTLAFLIPAVELLYHAQFAARNGTGVIVICPTREL
AIQTHAVAKDLLKYHSQTVGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFI
YKNLKCLMIDEADRILEANFEEEMKQIMKLLPKKDRQTALFSATQTKKVEDLARLSFQTT
PVYIDVDDGRNKVTNEGLQQGYCVVPSAKRFILLYSFLKRNQSKKVMVFFSSCNSVKFHS
ELLRYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDP
PDEPKEYIHRVGRTARGEGAKGNALLFLIPEELQFLRYLKEAKVPVKEYEFDQKKLANVR
SHLEKLVANNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFSSPPKVN
LNIDSSASKFRKKSRKVESRNGFSESNPYGKQGGEVGKRQFVRY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggaagagaagaagaaattgacgagaaaacgtaagcgcagtcgaaccaagaga
actgaagaaacagtcgccgagcatgaacaagctgctcaaatatctgatgatgaagaggaa
ctggaacaaactgaagaagagattgaagaggttgagaagaaagaagcggagaagtatgtg
aagtataaaaaggaaaaggatgagcggaaagatgaggacactgaggaagaagaagagaag
agagtgaaagtgaagaaccggggtgggagtgggattatgagtacgacgtcgtttgagtca
ctggggttgtctcagcatacttttagagctattcaggagatgggttttcaatttatgact
cagattcaagctagagcaattccgccacttatggttggcaaagatgtgcttggagctgct
aggactggttcagggaaaactcttgcttttctaatacctgcagtggagttgttgtatcat
gcccagtttgctgctcggaatggtacaggtgttattgtcatctgccccactagagagctt
gccattcagactcatgctgtggcaaaggatcttctcaagtaccactcccagactgttggt
ttggttattggtggttcagctagaagaggagaagcagaaaggattgtaaaaggagtaaat
ttgttagttgcaacgcctggtcgacttcttgaccatcttcagaacaccaaagggttcata
tacaagaacctgaagtgcttgatgattgatgaagctgataggatattggaagcgaatttt
gaggaagaaatgaaacaaattatgaagcttctaccaaagaaggataggcaaactgcttta
ttttcagccactcaaactaagaaggttgaggatcttgcccgcttgtcatttcagacaacc
cctgtttatattgatgttgatgatggacgaaacaaggttaccaatgaaggattgcaacaa
ggctactgtgttgtgccgagtgccaaaagatttatccttctgtattcatttctgaagagg
aatcagtcaaagaaagtgatggtcttcttttcatcatgtaattcagtcaaatttcattca
gaacttctcagatacattcaggtggattgctttgatatccatggaaagcagaagcaacag
aagcgaacctcaaccttctttgacttctgcaaagctgagaagggcatcttgctatgtact
gatgttgcggctcgtggacttgatattcctgctgtggactggattgtgcagtatgatcct
cctgatgaacccaaggaatacattcatagggttggtcgaactgctcgcggagaaggcgca
aaaggaaatgcattgcttttcctgattccagaagagttacaatttcttcgatatctgaag
gaggcgaaagtccctgttaaagaatatgaatttgatcaaaagaagctggcaaatgtgcgg
tctcatttggagaaattagttgccaacaactattatttgaacaagtcagctaaagatgca
tatcgatcatacatactagcgtataattcacactctatgaaagatatctttaatgttcac
cggcttgatctgcaggctgtagctgcgtcattttgcttctcatcacctccaaaggttaat
ctgaacatagacagcagcgcatccaagtttagaaagaaatcacgtaaagttgaaagtcgc
aatggatttagtgaaagcaatccatacggaaagcagggaggtgaagtcggtaaacgtcag
tttgtaaggtattag
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