KEGG   Mangifera indica (mango): 123214664
Entry
123214664         CDS       T07684                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like
  KO
K10839  UV excision repair protein RAD23
Organism
minc  Mangifera indica (mango)
Pathway
minc03420  Nucleotide excision repair
minc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123214664
  09124 Replication and repair
   03420 Nucleotide excision repair
    123214664
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:minc03051]
    123214664
   03400 DNA repair and recombination proteins [BR:minc03400]
    123214664
Proteasome [BR:minc03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    123214664
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      123214664
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 CUE UBA_RAD5A Rad60-SLD_2 UBA_3 Crinkler Ubiquitin_5 Dsc3_N TECR_N Ubiquitin_4
Other DBs
NCBI-GeneID: 123214664
NCBI-ProteinID: XP_044490530
LinkDB
Position
4:18085639..18091592
AA seq 391 aa
MKIFVKTLKGTNFDIEVKPEDTVVDVKKKIETVQGQDVYPAAQQMLIFQGKVLKDDTTLE
ENKVTENSFVVIMVTKTKKPSGESSTTSTAPTTKSAQTSTPTPAPAPATVLETSAPASAL
PASTPAPTPSPAVAPAPVTSVAAMSESNVYGQAASNLVAGNNLEGAIQQILDMGGGTWDR
DTVVRALRAAYNNPERAVEYLYSGIPEQAEAPSVTPVPVSTQAANSPTQASQPTPASASG
PNANPLDLFPQGLPDMGSGAAGAGTLEFLRNSPQFQVLRAMVQANPHLLQPMLQELGKQN
PALVRLIQEHQADFLGLVNEPIEGGEGNIGAQLSGAIPQAITVTPEEREAIERLEAMGFD
RETVLEVFFACNKNEELAANYLLDHMHEFED
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgaagattttcgttaaaacactcaaaggcactaacttcgacatcgaagtgaaacctgaa
gacacggttgttgatgtgaaaaagaagatagaaacagttcaaggacaggatgtttatcct
gctgcacaacagatgcttatttttcaggggaaagttctcaaagacgacactacattggaa
gagaacaaagtaactgaaaatagttttgttgtgattatggtaactaagacaaagaaacct
tctggcgagagttcaactacatcaactgcacctacaactaagtctgctcaaacaagtact
ccaaccccagcaccagccccagctacagttcttgagacttctgcaccagcatcagcactg
cctgcatccacacctgctcctactcctagtcctgctgttgctcctgcacctgtcacatca
gttgctgctatgtcagagtccaatgtctatggccaagctgcatctaatctggttgcaggg
aataacctggagggagcaatccagcaaattctcgatatgggtggaggtacctgggataga
gatactgttgtccgtgctctccgtgctgcatacaataacccagagagagctgttgaatat
ttgtattctggtatccctgagcaagctgaagctccatctgttacccctgtccctgttagt
acacaagctgcaaactctcctacccaggcatcacaaccaacacctgcttctgcaagtgga
cctaatgcaaaccctttagacctctttccacaggggcttcctgacatgggctcaggtgca
gctggggcaggaactcttgaatttttacgtaatagtccacagtttcaagtcttgcgagct
atggtgcaggccaacccacatttattgcagcccatgcttcaagagttggggaaacaaaac
cctgctttagtgaggcttattcaggagcatcaggctgacttccttgggcttgtcaatgaa
cctatagaaggtggtgagggtaatattggggcacagctttctggagcaattcctcaggca
ataactgtcacgcctgaagagcgtgaagcaatagaaaggcttgaagcaatgggcttcgat
cgggaaacagtattggaggtgttttttgcctgcaataagaatgaggaactggctgccaac
tatcttctggaccacatgcacgagtttgaggattga

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