Mangifera indica (mango): 123215297
Help
Entry
123215297 CDS
T07684
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123215297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123215297
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123215297
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123215297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
123215297
NCBI-ProteinID:
XP_044491268
LinkDB
All DBs
Position
5:complement(18595705..18599142)
Genome browser
AA seq
322 aa
AA seq
DB search
MELDSIECVPSSDLTDQDEIHHHLHQFPAITKPHINTNNNSSVSSVIHPGTTSVHELLEC
PVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKY
MSLGCPEIFPYYSKLKHEVVCNLRPYNCPYAGSECSAVGDIPFLVAHLRDDHKVDMHSGC
TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDAR
NYSYSLEVGGNGRKLIWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRV
TGRIWKEQQNPEGGACIPNLCS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatagcattgagtgtgtgccatcttcagatttgactgatcaggatgagatc
catcaccatcttcatcagtttcctgcaattacaaagcctcatattaataccaacaataac
tccagtgtctcttcagttattcatccaggcaccactagtgtccatgaacttcttgaatgt
cctgtttgtactaattcaatgtaccctccgatacatcagtgccacaatgggcatacactc
tgttcaacatgtaaaacaagggtacacaatcgatgccctacttgtagacaagagctcggt
gatataaggtgtctagctctagagaaggtagctgaatcgcttgaactgccttgcaagtat
atgtctcttggatgcccagagattttcccgtattatagtaaactcaaacatgaggttgtg
tgcaacttgaggccttacaactgtccgtatgctgggtcagagtgctctgctgttggggat
ataccatttctcgttgctcatctgagggatgatcacaaggtggacatgcattctggatgc
actttcaaccatcgttatgtcaagtctaatcctcgtgaagtagaaaatgccacatggatg
ttaactgttttccactgtttcggccagtacttctgtcttcattttgaagcttttcagctg
gggatggctccagtgtatatggcattcctccgtttcatgggtgatgagacagatgcccgt
aattacagctacagtctcgaggttgggggaaatggacggaaactcatttgggagggtacc
cctcgaagcataagagacagccacaagaaggtcagagacagccatgatggcctaattata
caacgcaatatggcactcttcttttctggaggagaccggaaagaattgaagctccgagtt
acaggccggatatggaaagaacagcagaacccagaaggtggggcgtgcataccaaacctc
tgtagttaa
DBGET
integrated database retrieval system
