Mangifera indica (mango): 123215728
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Entry
123215728 CDS
T07684
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
minc
Mangifera indica (mango)
Pathway
minc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
123215728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
minc03400
]
123215728
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
123215728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
HSBP1
Motif
Other DBs
NCBI-GeneID:
123215728
NCBI-ProteinID:
XP_044491873
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Position
5:complement(18577615..18580350)
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AA seq
667 aa
AA seq
DB search
MEEEGGKVRALIDKATNSTAREVDPRLLQAIKSVVRYSDSELRLAAQTLMDLMKRDHSQI
RYLTLLIIDELFMRSKLFRALVVENMDQLLSLSVGFRRNLPLPAPPAIASSLRSKAIEFL
EKWNASFGVHYRQIRLGYDYLKNSLRFQFPNLQANAARIQQERREREMRTKEILRNKFGM
LQKNFSSIKEEIQSTMDEIGECLDILCAKEEKVLLAPLDEDMEEFHSSELRQIRFDSLKE
GEKVHENNDNKVVFDALRELYKLLVSKHLISVQEWMSVLIRVEVPDSRFRDSMLKEFIDI
RNRLLSVKKKCEESGCSLANNVKPLKDEEEEDFWEEGKVGSIEDRKTGTPTKQNNNLAIA
STSHEVRDKDPKGSNEKVEGNGTLSHESGKVDSTSLRSKLLTEAPVMEWGSFLNYWGLDR
DVLANQRGLEVENHWGRVEFDAVIPAEKIAELNLQVSRYKEEPVEVQPCRAPLKKGGLCQ
RRDLEVCPFHGPIIARDDEGNPINQRSSMDEASAKTNQISSLGTPTKTNSLVDEMTSDLM
DQLAKQAVKNIRDRDKEEARKRKINKQLLSRAKLAKVREHNEAVLRDAALASASRSESVG
EEMEIGNGKKLPTRNKKPTLASMLHKKETAKDRLAQRLLNSRARDSTTRQLTIGEDANYR
EAFPNQW
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagggagggaaggttagggcgttgatagataaggctacaaactcaacagca
agagaggtggacccacgtctcctccaagccatcaaatctgtggttcggtattccgattcc
gagctccgactcgccgcccaaacactcatggacctcatgaaacgcgaccactctcagatt
cgatatctcacacttctgataattgatgagcttttcatgcgatcaaagctctttagggcc
cttgttgttgagaacatggatcaattattgagtttaagtgttggattcagaagaaatcta
ccacttcctgctcctccggctattgcatccagtttgcgttcaaaggccattgaattcttg
gaaaaatggaatgcttcatttggagttcactatagacagattagattgggctatgactac
cttaaaaactctctgaggtttcagtttcccaatttacaagcaaatgcagctcggattcag
caggagagaagggaaagggagatgaggacaaaagaaattttacgcaataagtttggaatg
ctgcagaaaaatttttcctcgataaaggaagaaatacagtcaaccatggatgagattgga
gagtgcttagacattctctgtgctaaagaggaaaaagtgttacttgctcccttagatgaa
gatatggaggagttccattcttctgaactgaggcagatccgttttgattcgttgaaagaa
ggggaaaaggtgcatgagaataatgacaataaagttgtttttgatgcattgagggagttg
tacaagcttttagtgtccaagcatctcatctcagttcaagaatggatgtctgttcttata
agggtggaagtgccggacagtaggtttagagattccatgctaaaggaattcattgatata
cgaaatcgtctactatcagtgaagaagaaatgtgaagaatctggttgttctcttgcaaac
aatgtgaaaccgctaaaagacgaggaagaagaagatttttgggaagagggtaaggttgga
tcaattgaggataggaaaactggcacaccaactaaacaaaataataatcttgccattgca
tcaacctctcatgaggtcagagacaaggatcccaaaggcagtaatgaaaaggttgaaggg
aatggcacactgagtcatgaaagcggcaaagttgattcaacatcacttaggagtaagctt
ttgactgaagccccagtgatggagtgggggtcatttttgaattattggggtttggacagg
gatgtcttggctaaccagaggggcttggaggttgaaaatcactggggtagggtagaattt
gatgcagtcatcccagctgagaagatagcagaacttaaccttcaggtgtctcgttacaaa
gaagaaccagtagaagttcaaccatgccgtgctcctttaaagaaaggtggcctttgtcag
agaagagatttggaagtttgtccatttcatggacccataatagcccgagatgatgaagga
aatccaatcaatcagagatcttcaatggatgaggcttctgctaagacaaatcagatctct
tcattaggtacacccactaagacaaactcattagtagatgagatgacttctgatttaatg
gatcaattggcaaaacaagctgtaaagaatatccgggatagagataaagaagaagcaagg
aagaggaaaattaacaaacaattgctgagtcgtgcaaaacttgctaaagttcgagaacac
aatgaagcagttttacgggatgctgcgttggcttcagcttcaagatctgaatccgttgga
gaagaaatggagattggcaatgggaagaaattaccgaccagaaataagaagccaactctt
gcatccatgttgcataaaaaagaaacagcgaaagataggctagctcagagacttttgaat
agccgagcaagggattcaacaacgagacagctgacgattggggaggatgcaaattaccga
gaagcctttccaaatcagtggtaa
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