Mangifera indica (mango): 123215882
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Entry
123215882 CDS
T07684
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
minc
Mangifera indica (mango)
Pathway
minc03020
RNA polymerase
minc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123215882
09124 Replication and repair
03420 Nucleotide excision repair
123215882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123215882
03400 DNA repair and recombination proteins [BR:
minc03400
]
123215882
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123215882
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123215882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Motif
Other DBs
NCBI-GeneID:
123215882
NCBI-ProteinID:
XP_044492089
LinkDB
All DBs
Position
5:complement(13108697..13110983)
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDTLKSAFEAEVAKHSRDY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccctgaccgttacgaacgtttcgtcgttcccgaggggaccaaaaaggtttct
tacgagagagacacgaagattatcaatgcggcgtcgttcactatagagagagaagagcac
actattggcaacattcttcgcatgcaattacatagagacgagaatgtgttatttgctggt
tacaagctccctcacccgcttcagtacaaaatcattgttaggattcacacgacaagccag
tcttcaccaatgcaggcatacaaccaggctatcaatgatctagacaaggaacttgacact
ctgaagagtgcatttgaggctgaggttgcgaagcattcaagggactattga
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