Mangifera indica (mango): 123215883
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Entry
123215883 CDS
T07684
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
minc
Mangifera indica (mango)
Pathway
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123215883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123215883
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123215883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
AAA_11
Motif
Other DBs
NCBI-GeneID:
123215883
NCBI-ProteinID:
XP_044492090
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Position
5:complement(13426005..13431625)
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AA seq
480 aa
AA seq
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MQSDNGKLFIGGISWDTNEERLKEYFSNYGEVVEAVIMKDRNTGRARGFGFVVFADPAVA
EIVIQEKHSIDGRMVEAKKAVPRDDQSMLNRNSSSIHGSPGPGRTRKIFVGGLASTVTEN
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPTRSPLGGYPYGLSRVNGLFNGYTQGYTPSTVGGYGLRMDARFSPVVGGRS
GFPPFGSGYGMGMNFEPGLGPSFRASGNFNSNISYGRGLSPYYIGNTNRFASPLGYDGGN
GGNSSFFSSVTRNLWGNGALNYNANTNSPSSNAYVGSGSGSIGGSSVGNSGVNWVSSAIS
AQGGGNNVSNSNVNFGYGGGDSNFGFGTGGYARNAGTTLAQTSSYASSNGGYDSVLGDLY
GGGSVYGDPTWTTSSAERDGSSSFAYGLGGGTSDVSAKNSPGFVGGYSVNKRQSNRGIAT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagataatggcaaattatttattggtggaatatcttgggacaccaatgaggag
cgcctcaaggagtattttagtaattatggggaggtagtcgaggcagtgattatgaaggat
cggaacacagggcgtgctcgtggattcggttttgttgtttttgctgaccctgctgttgct
gagattgtcatacaggaaaagcacagcattgatggaaggatggttgaggcaaagaaggct
gttcctagggatgaccagagcatgttgaatagaaacagtagcagcattcatggttctcct
ggtccaggtcgcacaagaaagatttttgtaggaggtttagcatccacagttactgagaat
gactttaagaagtactttgatcagtttgggactattactgatgttgtggtgatgtatgat
cacaacactcagaggccaagaggctttggattcatcacttttgattcagaggaggcagta
gacaaggtgttgcttaagacttttcatgaattgaatggtaaaatggttgaggttaagcga
gcagttcctaaagagttatcacctggtcccactcgcagcccactaggtggatatccctat
ggtctgagtagggttaatggcttgttcaatggctacactcagggatatactcctagtaca
gttgggggctatggacttaggatggatgctagattcagtccggttgttggtggtcgaagt
gggtttcctccatttggttctggttatgggatgggtatgaattttgagccaggcttaggc
ccaagtttcagagctagtggaaattttaatagtaatatcagttatggaagaggcctgagt
ccatattatattggaaatacgaataggtttgctagtccccttggatatgatggaggcaat
gggggaaattcctcttttttcagttcagtgacaagaaatttgtggggaaatggggccctt
aattataacgctaacactaattctccaagttccaatgcatatgtgggatctggaagtgga
agtattggaggaagtagcgttggcaatagtggagtcaattgggtctcttcagcgatttct
gctcaaggtggagggaataatgtttctaacagtaatgtgaattttgggtatggaggtggt
gatagcaattttggatttgggacaggaggatatgcaagaaatgctggaactactttggcc
caaacatcatcatatgcatcatcaaatggtggctatgattcagtcttgggggacctttat
ggtggtggttcagtttatggggatccaacatggacaacatcttcagctgagcgagatggt
tctagttcatttgcttatgggcttggtggtggtacttctgatgtttctgctaaaaattct
ccgggttttgttggtggttatagtgttaataagagacaatcaaatagaggaattgctacc
tag
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