Mangifera indica (mango): 123216207
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Entry
123216207 CDS
T07684
Name
(RefSeq) protein SLOW WALKER 1-like
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
minc
Mangifera indica (mango)
Pathway
minc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123216207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123216207
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123216207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_RFWD3
KNTC1_N
Beta-prop_HPS5
Utp13
Motif
Other DBs
NCBI-GeneID:
123216207
NCBI-ProteinID:
XP_044492540
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Position
5:16469858..16471744
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AA seq
531 aa
AA seq
DB search
MAKELPPKTTPGKSFLVKPKLKPKARTLSQTPESKYWSSFKTQQIPNLISSINSISFSQT
PPHLFAAAHSASLTLFSSQTLSQHSVISSFKDVVSCSSFRSDGSLLAASDLSGLIQVFDV
KTRTPLRRLKSHARPVHFVQYPSLDKLHVVSGGDDGIVKYWDVASENVVLDLFGHKDYVR
CGDCSPVNAEMFVTGSYDHTVKLWDVRVENSRSVMEVNHGKPIEDVMFLPSGGLFATAGG
NSVKIWDLIGGGKMLYSMESHNKTVTSICLGRLGNENGEEAMQYRILSVALDGYMKVFDY
INMKITHSMRFPAPLMSVAFSPDGMTRVIGTSNGSIFAGRRKKKENEESGLVNFWSIGRV
EEPQKRLLRPTYFRYFQRGQSEKPNESDYLVVRPKKLKLGEHDKLLKKFRHKEALVCVLN
GKNPENVVAVMEELVARRKLLKCVSNLDDEELGMLLSFLQKHSTVPRYSGLLMGLMKKVL
EMRAEDIKASDILKNHIRNLKRSVEEEIRIQHSLQEIQGIISPLLRIAGRR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagcttccacctaaaacaacaccgggcaaaagctttcttgtgaaacctaaa
ttgaaacccaaagccagaaccctttctcaaaccccagaatcgaaatactggtcctccttc
aaaacccaacaaatccctaatctcatctcctccattaattctatctctttctctcaaacc
ccacctcacctctttgccgctgctcattctgcttctctcactctcttttcctcccaaacc
ctctctcaacactccgttatttcctccttcaaagacgtcgtttcctgctcttcgtttcgc
tctgatggatctctccttgccgcctctgatctctccggactcattcaagtgttcgatgtc
aaaacgcggaccccacttcgtcgcttgaagtctcatgctcgtccggtacattttgttcag
tacccatctcttgataagttgcacgttgtgtctggtggtgatgatggtatagttaagtat
tgggatgttgctagtgagaatgtggtgttggatttgtttggacacaaggattacgttaga
tgcggagattgttctcctgtgaacgctgagatgtttgttacggggtcttatgatcacact
gtgaaattgtgggatgtgagagttgagaattcgaggtcagtgatggaagtgaatcatggg
aaaccaatagaggatgttatgtttttgccttcaggtggattgtttgcgactgcgggtggc
aatagtgtgaaaatttgggacttgattggaggggggaagatgttgtattccatggagagt
cataataagactgttacttcgatttgtttggggagattgggtaatgaaaatggagaggag
gcaatgcaatataggattttaagtgtggctttggatgggtatatgaaggtttttgattat
attaatatgaagattactcattctatgaggtttccggctccacttatgtctgttgccttt
tcacccgatggcatgaccagagttattgggacctcaaatggtagtatatttgctggtagg
aggaagaagaaggaaaatgaggagagtgggttagtgaatttttggagtataggcagagta
gaggagcctcaaaagaggctgttgaggcccacttatttcaggtattttcagagggggcag
agtgagaagccaaatgaaagtgattatttggttgtgagaccaaagaagttgaaattggga
gagcatgataaattgttgaagaagtttaggcataaggaagccttggtgtgtgtgttaaat
ggtaagaatccagaaaatgtggtggctgtaatggaggagttggtggctaggaggaagtta
ttgaaatgtgtttcaaatttggatgacgaagagcttgggatgctgttgagttttttgcag
aagcactccacagttccaagatactcagggttgttgatggggttgatgaagaaggttctc
gaaatgcgagctgaagatatcaaagcttctgatatattgaagaatcatattagaaatctg
aagcgatctgtggaagaagagataaggattcaacattcattgcaagagatacagggtata
atatctcctttgttgagaattgctggaagaaggtga
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