Mangifera indica (mango): 123216228
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Entry
123216228 CDS
T07684
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
minc
Mangifera indica (mango)
Pathway
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123216228
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
minc01009
]
123216228
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123216228
03036 Chromosome and associated proteins [BR:
minc03036
]
123216228
Protein phosphatases and associated proteins [BR:
minc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123216228
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123216228
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123216228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
DUF4187
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
123216228
NCBI-ProteinID:
XP_044492561
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Position
5:14165394..14173696
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AA seq
542 aa
AA seq
DB search
MDIDEVEDFPCLDPELLQLQELSSLTIKLRPQLAEELFARWLSLPDTVRLVKSLIADAKA
GVPINGLGNSSTVNFSGSNSLPSTFPAGSTPPLSPRSSSGSPHSPRISKQRSSHSSLGSP
LKFSIEPVQEVIPQFYFKNGYPPSKELKEECLSRINHRFNNPLGGLQIDEFKLVTKEICR
LPSFFSFALFRKIDIDCTGIVTRDAFIRYWVDDNMVTMDTATKIYKILKQPDCEYLTQGD
FKPILRELLASHPGLEFLHGTPEFQERYAETVIYRIFYHINRSENGRLTLGELKRGNLIA
AMQHVDEEEDINKVLRYFSYEHFYVIYCKFWELDTDRDFLIEKENLVRYGNHALTYRIVD
RIFSQVPRKFSSGVEGKMNYEDFVYFILSEEDKSSEPSIKYWFKCIDLDENGVLTLNEMQ
FFYEEQLHRMECISQEPVFFEDILCQIVDMIAPQREDCITLRDLKGCKLSGNVFNILFNL
NKFIAFESRDPFLIRQEREDPSLTEWDRFARREYIRLSMEEDVDNVSNGSAEPWEGSLEA
PF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggatattgatgaagtggaggattttccttgtttggaccccgagcttttgcagcttcaa
gagctttcttctttaacgatcaaactgagaccacaacttgctgaggagttatttgctcgg
tggctttcgctaccagataccgtccgactggtaaaatctttgattgctgatgctaaggca
ggtgtcccgattaatggacttgggaactcttctactgtgaatttttctgggagcaattca
ttgccttcaacgtttcctgctggtagtacacctccactctcacccagaagttcttctggt
tctccccattcccctcgcatttcaaaacagagaagtagccattcatctcttgggtctcca
ttaaaattctccattgaaccggtgcaagaagtcataccacagttctatttcaaaaatggc
taccctccatcaaaggaactaaaagaagaatgtctttcgagaattaatcaccgtttcaat
aatcctcttggcggattgcagattgatgagtttaaactagttacaaaggaaatatgccgg
ctaccatcctttttctcttttgcactttttagaaagatagacattgactgcactggcata
gtgaccagagatgcatttattaggtactgggttgatgacaatatggtgacaatggataca
gcaactaaaatatataaaattttaaagcaaccagactgtgaataccttactcagggtgac
ttcaaacctatccttcgagaacttttggcatcccatccgggtctggagttcctacatggc
acacctgaatttcaagaaagatatgctgaaactgtcatatacagaatattttatcatatc
aatagatcagaaaatggtcgtctcaccctcggggagctgaaacgtggaaatttgattgct
gccatgcaacatgtagatgaggaagaggacattaacaaagttctgaggtacttttcatat
gagcacttttatgttatatactgcaagttttgggaactagatacggaccgtgatttctta
attgaaaaggagaacctagtcagatatggcaatcatgcccttacgtataggatcgttgat
aggatattttcacaggtcccaaggaagttttctagtggggttgaagggaagatgaattat
gaagattttgtttacttcattctttcagaagaagacaaatcatctgagcctagtatcaag
tattggttcaagtgtatagatttggatgaaaatggagtgcttacacttaatgaaatgcaa
ttcttctatgaggagcagctgcatcgtatggaatgcatttcccaagagcctgtgtttttt
gaggatattttatgtcaaatagttgacatgattgctccacagagggaagattgtataaca
cttcgtgacttgaagggatgcaaattatcaggaaatgttttcaatatccttttcaatctt
aacaagtttattgcctttgaatctcgggatccatttctgattcgccaggaacgtgaggat
ccatctttgacagagtgggatcgctttgcacgtagagagtatatcaggctttctatggaa
gaagatgttgacaatgtctcaaatggaagtgctgaaccttgggagggatcacttgaagct
cctttttaa
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