Mangifera indica (mango): 123216452
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Entry
123216452 CDS
T07684
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
minc
Mangifera indica (mango)
Pathway
minc03030
DNA replication
minc03410
Base excision repair
minc03420
Nucleotide excision repair
minc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123216452
03410 Base excision repair
123216452
03420 Nucleotide excision repair
123216452
03430 Mismatch repair
123216452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minc03032
]
123216452
03036 Chromosome and associated proteins [BR:
minc03036
]
123216452
03400 DNA repair and recombination proteins [BR:
minc03400
]
123216452
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123216452
DNA Replication Termination Factors
ELG1-RFC complex
123216452
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123216452
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123216452
Check point factors
HRAD17(Rad24)-RFC complex
123216452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
AAA_lid_RFC1
AAA_22
Rad17
Motif
Other DBs
NCBI-GeneID:
123216452
NCBI-ProteinID:
XP_044492791
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All DBs
Position
5:21062760..21065275
Genome browser
AA seq
555 aa
AA seq
DB search
MFFGFYYYYFSLKKNKVIDIEVIWQYRSYRRHSCANAMPSPPVSRSSSSARAHSLIPPPS
NRSVCSAPSTAKLSYRRLGNFIIPGRKSSDSSSKLSEESLEAHNRRHTPVIHHKFTLNEK
KAKCSPYYKGLTDASLVISRERFVSSPGRESHATSISSSLSSFMLKMQEWSSCFAFKSPA
TVPLKKHNPPPTSSSYSPVTTSAKEIKLDVYPEKPLRERVSQSSTSKDTNIQMDRAKEFI
WVNKYQPKTLKDFICNRDKVIQLQDLVEEGGCRNFIFEGPPVAGKRTMICAMLREEFGPE
TVQTREACKVFDLKGELIGSIKVNVKESSQHIELNVSDLKGYEKHVILELKRETQSKLSD
SNPDNSKAIILPEADKLSTDALLYIRWLLERHKGLNNVFFCCSDVSKLQPIKSLCTVGQL
FPPSKQEIVEVLEFIAKQEGLELPHEFAEKIANESKNNLRQAIRSFEASWQMDYPFKDNH
QILTGWEDDITNIAKKIIEEQSPKQLYIIRGKLQNLIGHDVSLEFILKSLVEELKKHLDV
GLHSCVDNLYHEYNV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgttttttggtttctattattattatttttcattaaaaaagaataaagtaattgatatc
gaagtgatttggcagtatcgatcgtatcgcagacatagctgtgcaaatgcgatgccgagt
ccgccggtttcacgctcctcatcttcagccagagctcacagtttgatccctcctccctcg
aaccgctctgtttgttcggctccctccactgccaaactctcgtataggcgacttggaaac
tttataatccccggaagaaagagcagtgattcttcgtccaagctttccgaggagagtctg
gaggcccacaatagaagacacacccctgttattcatcataaattcactctgaatgaaaag
aaggcgaaatgcagtccctactacaaaggactcactgatgcatcccttgtcatcagtcgt
gaaagatttgtttctagtcctggccgtgaaagtcatgccacttctatttccagctctctt
tcctctttcatgctcaagatgcaagaatggagttcttgctttgccttcaaatcacctgcc
actgttccgctcaagaaacataatcctcctcctacttcctcttcttattcaccagtaaca
acttccgctaaggagatcaaattggatgtttatccggagaagccattgagggagagagta
tcacaatcatccacatcaaaagatacaaatatccaaatggacagagcgaaggaatttata
tgggtaaacaagtaccagcccaaaacgttaaaggattttatttgcaatcgagataaagtg
attcaactgcaggatctggtggaagagggcggatgccgaaattttatatttgaaggtcca
ccagtggcgggaaaaagaaccatgatttgtgctatgcttcgagaagaattcggaccagaa
acagtccagaccagggaggcgtgcaaggtgtttgacttgaagggggaactaattggtagc
atcaaagtaaatgtaaaggaatcttcccaacatatagaacttaatgtctctgatttgaaa
ggatatgaaaagcatgtcattcttgaacttaagagggaaacacaaagcaagctttccgat
tcaaaccctgacaacagcaaagcaattattttacctgaagcagacaagctatccacagat
gccttattatacatcaggtggttattagaaaggcacaaagggttaaataacgtttttttc
tgctgctctgatgtctcaaagcttcaacctattaagtcgctttgtactgttggtcagctt
tttcctccttcaaaacaagagatagttgaagttcttgaattcatagctaaacaagaaggc
ttagaattaccacatgaatttgctgaaaaaattgctaatgaatccaagaataatcttcgt
caagctattcgctcatttgaggcctcttggcagatggattatccgtttaaggataaccat
caaatattaactggctgggaagatgacattacaaatattgccaagaaaatcattgaagag
caaagcccaaaacagttatatatcatccgagggaagcttcaaaatctaatagggcatgac
gtctctcttgaattcattctcaagtcacttgttgaagaactaaaaaagcatttggatgtg
ggattacacagttgtgttgacaatctatatcatgaatacaatgtatga
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