KEGG   Mangifera indica (mango): 123216497
Entry
123216497         CDS       T07684                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1
  KO
K11797  PH-interacting protein
Organism
minc  Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:minc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:minc04121]
    123216497
Ubiquitin system [BR:minc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     123216497
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR55 Beta-prop_SCAP WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_DCAF4 Bromodomain WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_HPS5 VPS8_N Auxin_resp
Other DBs
NCBI-GeneID: 123216497
NCBI-ProteinID: XP_044492850
LinkDB
Position
5:complement(17318511..17333263)
AA seq 1716 aa
MDYWKHASFAGVSPLSKAPLNFSNTAQKMAQSDKQDRVTTQAVETEVAMDFREVYFLIMH
FLSSGPCQKTLGQFWNELLEHQLLPRRYHAWFSRSGGHSGNDNDDGISFPLSYSKLVERY
SHIEKDHLVKLLRQLISYKASPLNGRIGGNAPNAADVPTLLGSGSFSLLERDENMEYKQV
NPLPAYLRWPHMQADQVRGLSLREIGGGFPKHHRAPSSRSACYAIAKPSTMVQKMQNMKK
LRGHRDAVYCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNA
LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD
ARYSHCSPRTYVPKPSDAVSGKSNAPSSNGPSSSSIPQSHQILCCAYNANGTVFVTGSSD
TFARVWSACKSNTDELEQPIHELDVLSGHENDVNYVQFSGCAVASRSSISDALKEENVPK
FKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVPAPPLPPQPPRGGPR
QRLLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHNASSFVLDVHPF
NPRIAMSAGYDGRTIVWDIWEGTPIRTYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLN
TGQGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLAPHRRNIQDPLCDSSMIPYQEP
YQSMYQQRRLGALGVEWRPSSIKLAVGPDFSLGQEYAMPPLEDLERMMEPVPEFIDPLYW
EPEIDIVSDDTDSEYNIAEECSSEGEQGSLCSNSSSLPECSAEDSEVECDQLDRFRRSRR
RKHKNEAELKTASGRRVKKRDLDERDGPVSGSNKAKKSKSSQKALKRKSSKTKTMRPQRV
AARNARSMFSRISGTSSGEDDSDTEYESSNSDLVLQDSHIQSEEADRKLQIMRQQRKKEK
EQTIVESAYISKSFEVPEPQSNNGNRKRLVLKFSLRDSKKPLPSESTSVTGENQVKFVHP
SSRPSEEITEDGKIGTSTKDLLSTSAGGIDAEMSPSLKRIDFTNEMKGEKHDYHLGNSPG
DEQNKIRWGEVKIRTSKRLTLGVVMPIDTSNGLDAEFDGCKKSRSDIDGYEEKIGSDALL
NLDSMRNEEIAAGKDDKESSSFDSLPQVDHPQKVDAFTASYIGDGTNSPNELKENPSFKV
RIKTKGILRDPKSPSKQKIITAVEDLPSAEGDLISESPFCMEQNPASGVPPEGKGSGTSS
SDQLPGTNLKFKIYDGSKRERESFYKPRIVSENFDGGIEENISDAIHYNDSRNDFAKLTT
DSSHRTRSMRTKATPQEQSSVNHNVRFRFGHELVGTSKFVGNSSMEAGDDFVAGESMPTS
NVTLRLRSSKNKKGELFDESPQLSSEIKSKFPIRKLSWLMLSEHEVSYRYIPQLGDDVVY
LRQGHQEFTESTGSREAGPWKSIKGYIRAVELCKVENLVYATFPGSGECCCKLTLKFVDP
SSAVFGKTFKLTLPELIDFPDFVVEKTRYDAAVSRNWTVRDKCSVWWRNANGDGGTWWKG
RIVSSQAKSDDFPHSPWETYVIQYKTGDNHRHSPWELHEPKIPWQHPQIDFDSRDKLLSS
FSKLEQSVNRNQDYYGIQRLNEAAQKLDFLNRFPVPLYPEVIRLRLENNYYRNLEAVKDD
IKVMLSNAESYFVKNAGLLAKIDRLSNWFSRTLSKL
NT seq 5151 nt   +upstreamnt  +downstreamnt
atggactattggaagcatgcatcttttgctggagtttcccctcttagtaaagcacctttg
aatttttcgaacacagcacagaagatggctcagtcagataaacaagatagagtcactact
caggctgttgagactgaagtagctatggactttagagaagtttactttctgatcatgcat
tttctatcgtctgggccatgccagaagactttgggacaattctggaatgagcttctggag
catcagcttctacctagaagatatcatgcttggttttcaaggagtggaggacatagcggg
aatgataatgacgatggcatctcttttcctttaagttatagtaaattagtggagaggtat
tctcatatagaaaaggatcacttggtaaagcttctaaggcagctgatatcatataaagcc
tctcctttgaatggcaggattggaggaaatgccccaaatgctgctgatgttcctacatta
ttgggatctggttccttttcacttctagaacgtgatgaaaatatggaatataagcaagtt
aatcctctgccagcttacctacgttggccccatatgcaggctgaccaggttcggggtcta
agtttaagggaaattgggggtggtttcccaaagcaccatcgtgctccgtcaagtcgctct
gcatgttatgctattgctaaaccatcaaccatggtgcaaaagatgcaaaatatgaagaag
cttaggggtcaccgggatgctgtctattgtgccatatttgatcgctctggaagatatgtt
attactggctcagatgaccgtcttgtcaaaatttggtcaatggaaactgcattctgcttg
gccagctgtcgtggacatgaaggtgacataacggacttggctgtgagttcaaataatgct
ttggtggcatcagcttcaaatgattttgttattcgagtttggcggttgccagatgggtta
ccaatttcagttttgcggggacatacaggagctgttactgccattgcatttagtccaagg
cctagtgctatatatcaacttttatcgtcatcagatgatggaacttgtcgaatctgggat
gctcgatattcccattgtagtccacgaacatacgtgcctaagccttccgatgccgtttct
ggtaaaagcaatgctccatctagtaatggtccctcatcaagtagtattccacaaagtcac
cagatactatgctgtgcttataatgccaatggaactgtttttgtgacgggtagctctgac
acttttgcaagggtctggagtgcctgtaaatcaaacacagatgaattggaacaaccaatc
catgagttggatgtcttgtctgggcatgaaaatgatgtcaactatgtccaatttagtggc
tgtgctgtggcttcaagatcttcaatttctgatgctttgaaggaggagaatgttccaaaa
tttaagaactcctggttctgtcatgataacattgttacctgttctcgtgatggtagtgca
attatttggataccaagatcacgtagatcccatggaaaagttggacgttggactcgtgca
tatcatttgaaagttccagcccctccactacctcctcaacctcctcgaggaggccctcgt
caaagacttcttccaactcctcggggtgttaacatgattgtgtggagcttggataatcgc
tttgttcttgcagctatcatggattgccgaatatgtgtatggaacgctgttgatggtagc
ttggtacattctttgactggtcataatgcatcttcttttgtcttggatgttcatcctttt
aaccctaggattgccatgagtgctgggtatgatggcagaacaatagtttgggatatatgg
gagggcacacctataaggacatatgaaataggacgtttcaagttggttgacgggaagttt
tctccggatgggacatcaattgtactttcagatgatgttggccagatatatctgctaaat
actggtcagggtgagtctcaaaaggatgccaaatatgatcagttcttccttggtgattat
agaccccttattcgagatagtcttggaaatgttcttgatcaggagacacagcttgctcca
catagaagaaacattcaagatcctctttgtgattcaagtatgattccatatcaagaacct
taccagagtatgtaccagcaacgtcgacttggtgctctgggtgttgagtggcgaccttca
tccataaaattagctgttggaccagattttagtttaggccaagaatatgcaatgcctccc
ttggaagatttggagagaatgatggagccagtacctgagttcatagatcctctctactgg
gaaccagaaattgacatagtaagtgatgacactgattcagagtacaatattgcagaggaa
tgttccagtgaaggtgagcaaggaagtttgtgttccaattcatctagtcttccagagtgt
agtgcagaagatagtgaggttgaatgcgatcagctagacagatttcgcagatcaagaaga
agaaaacacaagaatgaagctgagttaaagactgcatctggcaggcgtgtcaaaaagagg
gatttggatgagcgtgatggacctgtttctgggagtaacaaggctaagaaatcaaaaagt
agccagaaagctttaaagagaaagtcctctaaaacaaagacaatgcgacctcagcgagtt
gctgcacgcaatgcccgaagtatgttctctagaatttctggaacttcaagtggtgaagac
gattcagatacagaatatgaatcgtcaaacagtgatttagtgctgcaagattcacacatt
caaagtgaagaagctgatagaaagttgcagatcatgcgacagcaacggaagaaggagaaa
gagcaaacaattgtggagtctgcatatatatccaagtcatttgaagtccctgaacctcag
tcaaataatgggaaccgcaagagattggtcttgaaattttctttacgggactctaagaag
cctttgccttctgaaagtaccagcgtaaccggtgagaatcaggtgaagtttgtgcatcca
tcatcaagaccttctgaagaaattactgaagatggaaaaattggtacaagcacgaaagat
cttctgtcaacttccgcaggtgggattgatgctgagatgtccccaagtctcaagagaatt
gattttaccaatgaaatgaaaggtgaaaagcatgattatcatctgggaaattctccaggt
gatgagcagaacaaaatcaggtggggagaggtgaagatccgcacatccaaacgtttaact
ctgggagtagtgatgccaattgatacatccaatggacttgatgcagagtttgatggctgt
aagaagagcagaagtgatattgatgggtatgaggaaaaaattggaagtgatgctttgctg
aatctggatagtatgagaaatgaagagattgctgctggcaaggatgataaagaatcttcg
tcatttgactctttaccccaggttgatcacccacagaaagttgatgcttttacagcttct
tatattggagatggcacaaactctcctaatgaactcaaagaaaatccatcattcaaggta
agaattaaaacaaaagggattttgagggatcctaaaagtccttcaaaacaaaaaatcatc
actgcagttgaggacctgcctagtgctgaaggtgatttgatatctgaaagtcccttttgc
atggagcagaatccagcttctggagtaccaccagagggtaaaggttctggtacatcaagt
tctgaccagttaccgggtacaaatttgaagtttaagatatatgatgggagtaagagggag
agggaaagtttttataagcctagaattgtttcggagaattttgatggtggtattgaagaa
aatatttcagatgccatacactataatgattcaagaaatgattttgcaaaactgacaact
gattcatcacacagaacaagatccatgaggacaaaggcaactccacaggagcaaagttct
gttaaccataatgtgagattcagatttgggcatgaattggttgggacatcaaaatttgta
ggaaactcctccatggaagcaggtgatgattttgtagctggagaatcgatgccgacttca
aatgtgacattgagattaaggtctagtaaaaacaagaagggtgaactttttgatgaaagt
ccacaactgtcgtctgaaataaagtcaaaattccctattagaaaattgtcatggttgatg
ttgtcagagcatgaggtgagttatcggtacatccctcagctaggcgatgatgttgtatat
ttgagacagggccatcaagaatttactgaatcaactggctcacgtgaagcaggtccttgg
aagtcaattaagggatacatacgtgcagtggaactttgcaaggttgaaaaccttgtctat
gctacatttcctggttctggagaatgctgctgcaaactcacccttaaatttgttgatcct
tcatctgctgtgtttggtaaaacattcaagttgaccctgccggaattgatagattttcct
gattttgttgttgagaaaacacggtatgatgctgctgtcagcagaaattggacggtaagg
gataaatgcagtgtttggtggagaaatgcaaatggggatggtggtacttggtggaaaggt
agaattgtttcttcacaggccaaatctgatgatttccctcatagtccatgggaaacatat
gtgattcagtacaagactggagataaccatcggcacagtccttgggaactgcatgagcct
aagattccatggcaacatcctcaaattgattttgacagtagagataagctgctatcgtct
ttttctaaattagagcagtcagtgaacagaaatcaggattactatggtattcagagattg
aatgaagctgctcagaagttagatttcttgaacaggtttccggtgccattatatcctgaa
gtgatccgattgagattagagaacaactattatcggaacttagaagctgtgaaagatgac
attaaggtcatgctgtcaaatgctgaatcttattttgtgaaaaatgctgggttattagcc
aagatagaccgcctatccaattggttttcaaggacactgtcaaaattgtag

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