Mangifera indica (mango): 123216603
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Entry
123216603 CDS
T07684
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123216603
Membrane trafficking [BR:
minc04131
]
Autophagy
Other autophagy associated proteins
Others
123216603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
WDR55
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_RSE1_2nd
PEP5_VPS11_N
Ge1_WD40
Beta-prop_TEP1_2nd
CPSF_A
Izumo-Ig
DUF7099
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
123216603
NCBI-ProteinID:
XP_044493010
LinkDB
All DBs
Position
5:16748975..16752693
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AA seq
444 aa
AA seq
DB search
MATLSEYSSPWPDPNPNPNLNSNPNPNPNPNPNPNPNSDFIPSNEDLRDLDSFSSMSPVQ
SDPFSSAIPQTNSNFHPPLSSASESASPASTPPPSLLHLSFNQDHGCFAAGTDHGFRIYN
CDPFREIFRRDFDRGGGIGVVEMLFRCNILTLVGGGPDPHYPLNKVMIWDDHQSRCIGEL
AFRSEVRSVKLHRDRIVVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQVTGSLVLV
CPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATASTKGTLVRIFNTLDGT
LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNTGSFRADKKQTSSDPSF
ASSPTSSLSFIKGVLPKYFSSEWSVAQFHLVEGSAYIVAFGHQKNTVVILGMDGSFYRCE
FDPVNGGEMTQIEYHNFLKPEAVF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctactctttctgagtattcatctccttggcctgaccctaatcccaatcccaatctt
aattccaatcctaatcctaaccctaaccctaaccctaaccctaaccctaattctgatttc
attccttccaacgaggatctacgcgaccttgattccttttcgtcaatgtctccggtccaa
tccgaccccttttcttctgctattccgcagaccaactccaattttcacccccctctttct
tcagccagcgagtccgcctcacccgcatcaacacccccaccttccctccttcacctctcc
ttcaaccaagaccatggttgtttcgccgccggcacggaccacggcttcaggatctacaat
tgtgaccctttccgtgagatatttcgtcgagattttgaccgcggtggagggatcggagtc
gttgaaatgcttttccgatgcaatatattaacccttgttggtggtggaccggacccacat
tatccccttaacaaggtgatgatctgggacgaccatcaaagccgatgcatcggcgagcta
gcatttaggtcggaggttcgatcggtaaaactccatcgcgacagaatcgtggtggttttg
gaacagaagatattcgtgtataatttcgcggatttgaagctgttacatcagattgaaacc
attgcaaatccgaaagggttatgtgcagtgtctcaggtgacgggttcgttggtgctggtg
tgtcctgggttgcagaagggacaggttagggtggaacattacgcctccaaaaggacaaag
tttatcatggctcacgactcaagaattgcgtgtttcgctttaactcaagatggacagttg
cttgcaacggccagcaccaaaggaacccttgttcgtatttttaatactcttgacggtacc
ttgctgcaagaggtgaggaggggtgctgatagagcggagatttatagtctggccttctct
tcaaatgcccagtggctggcagtctcaagtgataagggcactgtccatgttttcaacctt
aaggttaatactggatcctttagagcagacaagaaacaaacttcatctgatcccagtttt
gcctcatcacctacctcatccctctctttcatcaaaggggtgttgcccaagtatttcagc
tcagagtggtcagtggctcagttccatttagtcgagggttctgcatacattgttgccttt
ggtcaccaaaagaatacagtggtaatccttggcatggatggaagcttctatcgatgcgag
tttgacccagttaatggtggagaaatgacacaaattgaatatcacaactttctaaagcca
gaagcagtgttctga
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