Mangifera indica (mango): 123216804
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Entry
123216804 CDS
T07684
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123216804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123216804
Spliceosome [BR:
minc03041
]
Common components
Common spliceosomal components
SR proteins
123216804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
RBD_RDR6
RRM_Nup35
RRM_fung
Motif
Other DBs
NCBI-GeneID:
123216804
NCBI-ProteinID:
XP_044493312
LinkDB
All DBs
Position
5:18355068..18358460
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AA seq
270 aa
AA seq
DB search
MSRPIFVGNFEYETRQSELERLFSKYGRVERVDMKSGFAFVYFEDDRDASDAIRGLDNHP
FGYDRRRLSVEWARGERGRHREGSRSMANQRPTKTLFVINFDPIRTKERDIKRHFEPYGN
VLHVRIRRNFAFVQFETQEDATKALDATNRSKLLDRVISVEYALKDDSERDDRYDSPRRG
SYGRRGDSPYGRSPSPAYRRRPSPDCGRARSPVYDRYNGPAYDRRRSPDYGRNISPGPVY
DKRRSPGYGRNRSPEYGRYRSRSPVRRSRT
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacccattttcgtcggaaactttgagtacgagactcgccaatctgagctagag
cgtctcttctccaaatacggaagagtggagcgagttgacatgaaatctggctttgctttt
gtttattttgaggatgatcgggatgcttcagatgccattcgtggacttgataatcatccg
tttggatatgaccgacgcaggctgtcggtggagtgggctaggggtgaacgtggtcggcat
cgtgaagggtctaggtcaatggcaaatcaaaggcccactaaaaccttgtttgtgataaac
tttgatcctattcgaacaaaagagcgggatataaaaaggcattttgagccttatggaaat
gttctgcatgttcggattcgacggaactttgcatttgtgcagtttgaaacacaagaagat
gcaacgaaggcccttgatgctaccaatagaagcaagttattggacagggttatttctgtt
gagtacgctttaaaagatgatagtgagagggatgaccgatatgatagccctagaagaggt
agttatggtaggcgtggagatagtccgtacgggaggtcaccaagtcctgcttatcgtagg
agaccaagtcctgattgtggccgagcccgcagcccagtttatgatcggtacaatggaccg
gcgtatgacaggcgcagaagtccagattatgggaggaacattagtcccggtccagtgtat
gacaagagaaggagtcctggttatggccggaataggagtcctgagtatggtagataccgc
agccgatctccagttagaaggtcaagaacttga
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