Mangifera indica (mango): 123217017
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Entry
123217017 CDS
T07684
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123217017
Enzymes [BR:
minc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123217017
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
90S particles
Helicases
123217017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
ATPase
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
123217017
NCBI-ProteinID:
XP_044493683
LinkDB
All DBs
Position
5:complement(17089641..17096678)
Genome browser
AA seq
1339 aa
AA seq
DB search
MAKRKNRNETKRRQGSRHSLEGFDSNAMILPANKRDQKQTNEESEKVQTKENSNLSKSQK
RKLKKLEEEKEKAYMSLKTMENFEKYKISPGVYNLLEASKDMGKVQTRLEKKRNAVQFTK
AGLEDLQNDQASKRRREGGASCETKPVLDKPHPGQPINAYDLEQPLMLDKNVLDDASVSL
GSSQEPVHCDEHDSNGKSVSALSCEEVSNEDSGTNMPQDVGNCAPTLSIHDGGRISKPMP
GDLMLGQVLSDESLNINFSRTSNVPGSLQRPPMAPIVVHVLRPKEVENKRKDLPIVMMEQ
EIMEAVNYNPTVIICGETGCGKTTQVPQFLYEAGFGSNQCSKRCGIIGVTQPRRVAVLAT
AKRVAFELGLHLGKEVGFQVRHDKKIGDNCSIKFMTDGILLRELKYDVLLRKYSVIILDE
AHERSLNTDILIGMLSRIIQPRQALYEKQQQLLLSGQHVDPKDKIFPLKIILMSATMRVE
DFIGGGRLFRDPPVIEVPTRQYPVTIHFSKRTEIVDYLGQAYKKVMSIHKRLPQGGILVF
VTGQREVEYLCRKLRKASKELIATTSKGNIGDEVTAVSETNSLEGINMKEINEAFEIQGN
STEQQTDRFSSYDEDQFDLHEDESDTSYDSETESETEILGENGNLLVQEPPKNDDNIVDV
SGENWSLASLKVAFEALADKKALGSAERNRTTPTAPEQCSEQFNSAVEKMELDKGSYAGA
LCVLPLYAMLPAAAQLCVFEDIKEGEQLVVVATNVAETSLTIPGIKYVVDTGREKVKKYN
SANGMEAYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNILPDFSCAEICKVPVD
SMVLLMKSMNIDKVANFPFPTPPEASALVEAERCLKALEALDSNGRLTALGKAMAHYPMS
PRHSRMLLTLIQIMKTKSYARANLVLGYAVAAAAALSLSNPFVMQSEGSKNNTDDLNLDE
GSNIVESENIIYKQEKLKKKKLKEVAKVSRENFYNPTSDALTVAYVLQCFELSKSPVEFC
NENALHLKTMEEMSKLRKQLLHLVFSQSGNCGQDFSWTHGTLEDVEHSWRISCSKNILLQ
NEEELLCRAICAGWADRVAKRIRPKTRPFKDGKVNAVRYQACMVKEDVFLHRRSSVASSA
PELLVYSELLQTKRPYLHGATCVKPDWLVEHARALCSFSRSLENSKSSYDCQTDQVLYWV
NPIFGPHNWELPLHRLPISSDDRHRVAVFACALLEGRVLPCIKYVQAFLAAPPSTILQPE
ESGQKRVGKLLSKLKSRSIDSCAMLKKVWDEDPKALHSEILNWFQKGFHHKFEGLWLKMI
AEVHLEPHERFPKKVKGKK
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaagaatcggaacgagacaaagcgccgacaaggttcacgccatagtttg
gagggttttgatagcaatgcaatgattttgccggcaaataaacgtgatcagaagcaaacg
aatgaggagtctgaaaaggttcaaacaaaagaaaattcaaacctcagcaaatctcagaag
agaaagttgaagaagctggaggaggagaaggagaaagcgtacatgtctttgaaaaccatg
gaaaactttgagaaatacaagatctcaccaggcgtgtataatcttttggaggcttccaaa
gatatgggtaaggttcaaaccaggcttgaaaagaaaaggaatgctgtgcaatttaccaag
gcaggtttagaagatctgcaaaatgaccaagcttccaagagaaggcgtgaagggggtgct
tcttgtgaaactaaaccagttttggacaaaccccatcctgggcagcctatcaatgcatat
gatcttgagcaaccattaatgcttgacaaaaatgtgttagatgatgcctctgtttctttg
ggttcttctcaggagccagttcattgtgatgaacatgattcaaatggtaaatctgtttca
gcactatcctgtgaagaagtttcaaacgaggacagtggcacaaatatgccccaagatgtt
ggaaattgtgcaccaactttatccatacatgatggtggaaggatttctaagccaatgcct
ggggatttgatgctgggacaagttttatcagatgagagcctaaacataaacttcagcagg
actagcaatgttcctggttctttgcagaggcctcctatggctccaattgtggtgcatgta
ttgagaccaaaagaagttgaaaacaaaaggaaagatcttccaatagttatgatggagcag
gagataatggaagctgtaaattacaacccaacagttattatatgtggagagacaggttgt
ggcaagacaacacaagttcctcagttcctttatgaagctggttttggttctaaccaatgt
agcaaacgatgtggtattattggtgtgactcaaccacgtcgtgttgctgtccttgccact
gcaaagcgagtggcatttgaactcggtcttcatctaggcaaagaagttggttttcaagtt
aggcatgataagaaaattggtgacaattgctccatcaagtttatgactgatggaatatta
ctacgggaacttaagtatgatgttttattaaggaaatactctgtcataattctggatgaa
gctcatgagaggagcttgaatacagacatacttattggaatgctttctcgtataattcag
cctcgccaggctctgtacgagaagcagcagcagttgttgctttcaggacaacatgtagac
cctaaagataagatatttcccctaaaaattattctgatgagtgctaccatgcgagtggaa
gacttcattggtggaggaaggttatttcgtgatcctcctgttatagaagttcctaccaga
cagtatccagtgactatacatttctcaaagagaacagaaattgttgattatttaggccaa
gcctacaagaaagttatgtcaattcacaagaggctaccacaaggtggcattcttgtattt
gttacaggtcagagggaggtggaatacttgtgtcgtaagttacgtaaagcttctaaagag
ctgatagcaactacttctaaagggaatattggtgatgaggtcactgctgtctctgaaaca
aactctttggagggcattaatatgaaggagatcaatgaagcatttgaaattcaaggaaac
tcaactgagcagcaaactgacagatttagctcttatgatgaagatcaatttgatttgcat
gaagatgagtcagatacttcttatgattcagaaactgagagtgaaacagaaattcttggt
gagaatggaaatttactggtgcaggaacccccaaagaatgatgataatattgtagatgta
tcaggggagaactggagtcttgcttctctcaaggtagcttttgaagctttggctgacaaa
aaggcattaggctctgctgaaagaaaccgaaccactcctactgcaccagaacaatgctct
gagcaattcaattctgctgtagagaagatggaacttgataaaggttcctatgctggtgca
ttgtgtgttctgcctctttatgcaatgctgcctgctgcagcacagctttgtgtattcgaa
gatattaaggaaggagagcagcttgttgttgttgccaccaatgtggctgaaacatcctta
accataccaggaataaagtatgtggttgatactggtagagagaaagtgaagaaatacaac
tcagctaatggcatggaagcatatgaggtacaatggataagtaaggcatcagctgctcaa
cgtgctggacgagctggaagaactgggcctggccactgctaccgcctgtattcatctgca
gttttcagtaacatacttcctgatttctcctgtgctgaaatatgtaaagtacctgttgac
agcatggttcttctaatgaaatccatgaatattgataaggttgcaaatttcccatttcca
actcctcctgaggccagtgctttggttgaagcagagcgttgcttgaaggctcttgaagct
cttgatagcaatggaagattgacagctttgggtaaggccatggctcattacccaatgagc
ccccgtcattcccgcatgctcctcacacttatccaaattatgaaaacaaaaagttatgct
cgtgcaaatctagttctgggatatgcagttgcagcagcagctgctttaagcttgtcaaat
ccttttgtcatgcagtcggaaggaagtaagaataatacagatgacttgaacctggatgag
ggctccaatattgtagaaagtgagaatattatttacaagcaagaaaaattgaagaaaaag
aaactaaaagaagtggctaaagtgtcccgagaaaatttctacaatcctacaagtgatgcc
ttgaccgtagcttatgttttacagtgttttgaactttccaaaagcccggtggaattctgc
aatgaaaatgccttgcacctgaaaaccatggaagaaatgtccaagttgagaaagcaactt
cttcatttggtctttagtcaaagtggtaattgtggtcaggatttctcatggactcatggg
actctggaggacgtagaacactcttggaggatttcctgcagtaagaacatccttctacaa
aatgaggaagaactcttatgccgagctatctgtgctggctgggctgacagagttgccaaa
cgaattagaccaaaaacaagaccatttaaagatggaaaagttaatgcagttagatatcag
gcctgtatggttaaagaagatgtgtttctccatcgtcggtcatctgttgctagttcagct
cctgagttgttggtgtacagtgaattgttacaaacaaaacggccgtaccttcatggagct
acatgtgtgaaaccagattggcttgtcgagcacgcaagagcactgtgcagtttttcaaga
tcacttgaaaactccaaatcttcttatgactgtcaaacagaccaagtgttatattgggtc
aatccgatctttggtcctcataattgggagcttccattgcataggttaccaattagcagt
gatgacaggcatcgcgtggcagtatttgcttgtgctttgcttgaaggccgggttttgcca
tgcataaaatatgttcaagcattcctggctgctccgcctagtactattttacagccagag
gaatctggtcaaaaaagggttggaaaacttttaagtaaactaaaatcgaggtcaattgac
agctgtgcaatgttaaagaaggtatgggatgaggaccctaaagctctgcattcagaaatt
ttaaactggtttcagaagggtttccaccataaatttgaagggctttggttaaaaatgatt
gctgaagttcatttagagcctcatgaacgctttcccaaaaaagtgaagggaaaaaagtag
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