Mangifera indica (mango): 123217053
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Entry
123217053 CDS
T07684
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123217053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123217053
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123217053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG17_like
FapA
HK_sensor_dom_bact
Motif
Other DBs
NCBI-GeneID:
123217053
NCBI-ProteinID:
XP_044493736
LinkDB
All DBs
Position
5:complement(20552649..20560510)
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AA seq
770 aa
AA seq
DB search
MSGFSFSQSGQSSTSSPFSFGSSSSLGSTAFSSSNPSTSSPFSLSFNAASSNPSSTASST
TTSPFSFSLNTSSSITTTSTNPSSASFGFGSGLSNTGSTTTPSLFGATSSSATSASSLFG
TPSTFGTASSGGASAPSLFGAFTSSTTTTPFGTSFSATSTSSPFGTGLSAAGNSAFPSFG
SSTSVAATSSSPLFGASSSAAATTASLLFGTSSSTAGTTASPLFGTSSSTAGTTASPLFG
TSSSTAGTMASPLFGTASSTAGATTSPPLGASSTTTGSATSLFGGIGASAAFSTTKSTTP
AFSSAFPLGSSSNSTSTSTTGSSPSFSASTGFSIPSSFSFSQNTQSSTSTASQPSLTSSS
SSASSSSFSFGTPASQPSFSFNNATAASSTAGISSTPSAKATSLSFGATPSAPLFSTVTT
TTASTSSAASTATPATTTTATLPAIGVSFSSAAVTSSASAPASSGSSSSSFTGFGMISST
STSSGTTSSFTGFSLSTKTATPASSSQSQSSVGAPVFSIPTSTSAAATTSSTSAPAAQTS
SSLVVASSSGTTTTVSTTVSATPKLPSEITGRTVEEIIKEWNAELQERTGKFRKQASAIA
EWDKRILQNRDVLLRLEIEVAKVVETQANLERQLELIETHQQEVDKALQSMEEEAECIYK
DERGLLLDDEAASTRDAMYEQAEFIEREMEQMTEQIKSIIQTLNANQGGGLDGIDGMAPL
DVVVRILNNQLSSLMWVDEKAEEFSLRIQKLANQGSAADRELMGPKFWMS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttttcattttctcaatctggccaatcgtcaacctcctccccgttctcgttc
ggatcttcctcttcattgggatccaccgctttctcttcttcaaaccctagtacttcttcc
cctttctcactctctttcaacgccgcttcttcaaaccctagctctactgcctcctcaacc
actacatctcctttctctttctcgctaaacacctcctcttccatcaccaccacttccaca
aatcctagctccgcttcttttggcttcggttcaggtttatctaataccggttcaactact
actccatccctgtttggggcaacttcatcctccgctacatccgcttcctcgctgttcgga
acgccttcaacttttgggactgcgtcatccggcggtgcatctgcaccctcactgtttgga
gcatttacatccagtactactacgacgccgtttggaacatcgttttctgccaccagtacc
tcttcaccgtttggaacaggtttatccgcagcaggaaactctgcctttccctcatttgga
tcgtctacttcagtggcggcaacttctagttctcccttgtttggagcatcttcttccgcg
gctgcgactacagcttctctcttgtttggaacatcttcatccacggctgggactacagct
tcgcctctgtttggaacatcttcgtccacggctgggacgacagcttcgcccctgtttgga
acatcttcgtccacggctgggactatggcttcgcccctgtttggaacagcttcatcgacg
gcgggagctacaacttctcccccattaggagcatcttcaaccaccacaggttctgcgaca
tccttatttggaggtattggtgcttccgctgcgttttctactacaaaatcaactactcct
gcattttccagcgcgttccctctgggttcatcttcaaattcgacttcaacttcaaccact
ggttcatctccatctttctcggcgtctactgggttttccatcccttctagtttctcattt
tcacaaaatactcaaagttcaacatctacagcttcacaaccttcgctaacatcttcttca
tcatccgcaagctcttctagcttttcatttggaacaccggcttctcagccttcattcagc
ttcaacaatgctactgcagcttcttccaccgccggaatctctagcacaccttccgcaaag
gccacttcactgtcttttggcgcaacaccttcagcgccattgttctctaccgtcactacc
acaactgcttccacctcttccgccgctagtacggccacacctgctacaactacaactgct
acattgcctgctattggtgtgagtttttcctctgctgcagttacatcttcagcatcggca
cctgccagctctggttccagttctagttcttttactggttttggcatgatcagtagtaca
tctacttcttctgggactactagctcttttacaggtttttcactgtccacaaaaacagct
acgcctgcttcttcatcacaatcacaatcttcagttggggcacctgttttcagtatccct
acctcaacttctgctgcagcaacaacttcaagtaccagtgctcccgctgctcaaacgtct
tcctctcttgttgtggcttccagtagtgggacaactacaacagtcagtacgacagtgtct
gctacaccaaaattaccgtctgagatcacagggcgaactgttgaggagatcatcaaggag
tggaatgcggagttacaagagcgcactgggaagtttcggaagcaagctagtgccatagct
gagtgggacaagaggatcttgcaaaaccgtgatgtccttctcaggcttgagattgaagtt
gcaaaagtggttgagacccaggctaacctggagcgacagcttgagttaattgaaactcat
cagcaagaggttgataaggctctacaaagtatggaagaagaagctgagtgcatttacaag
gatgagcgtggattacttcttgatgatgaagccgcctcaactcgagatgcgatgtatgag
caggctgaatttatcgagagagaaatggagcagatgactgagcagataaaatcaatcatt
cagactttaaatgctaaccaggggggaggacttgatggaattgacgggatggctccactg
gatgtggttgtccgaattttaaacaatcaactaagttctttaatgtgggttgatgagaag
gctgaggagttctctctgcgcatccaaaagcttgctaaccaaggttctgctgcagatcgt
gaattgatgggtccaaaattttggatgtcttga
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