Mangifera indica (mango): 123217237
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Entry
123217237 CDS
T07684
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123217237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123217237
Spliceosome [BR:
minc03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
123217237
Complex B
123217237
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
xRRM
Motif
Other DBs
NCBI-GeneID:
123217237
NCBI-ProteinID:
XP_044494060
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Position
5:complement(16974255..16976991)
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AA seq
247 aa
AA seq
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MEEVNPGNEIPRNMTIYINNLNEKIKLEGYASTISFSLYIFFSQFGKILAVLAFKTLKHK
GQAWVVFEDVSSATSAIRQMQGFPFYDKPMRIRYAKTKSDIIAKADGTFVPRERRKRHED
KGKKRREQHDANQAGMGLNPAYAGAYGATPALSQIPYPGGAKSVVPEAPAPPNSILFVQN
VPHDTTPMALQMFFLQFPGFKEVRMVEAKPGIAFVEYGDEMQATVAMQGLQGLKIGQQNL
LISYAKK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtaaatccaggcaatgaaattcctcgaaacatgaccatttatattaataac
ctcaacgagaaaatcaaactcgaaggttatgcttccaccatctctttctctctttacatt
tttttctcacaattcgggaagatattggcggttttggcattcaagacactgaagcacaaa
ggccaagcttgggttgtgtttgaggatgtttcctccgctactagtgctatccggcaaatg
cagggtttccccttctatgacaagcctatgagaatacgatatgctaaaacaaaatcagat
ataatagcaaaggcagatggtacatttgttccacgtgaaagacggaaaaggcatgaggac
aagggaaaaaaacgaagagagcaacacgatgctaatcaagctggaatgggtctgaatcct
gcatatgctggtgcctatggtgcaacacctgcgctgtcacaaataccctatccaggtggt
gcaaaatctgtggtcccagaggctccagctccaccaaatagcatactatttgtccagaat
gttccccatgacacaactccaatggcactgcaaatgttcttcctccagttccctggtttc
aaggaggttaggatggtggaagcaaagccaggaattgcctttgtggaatatggagatgag
atgcaagcaacagtagcaatgcagggactccaaggcttgaagatcggccaacaaaacttg
ttgatttcctatgccaaaaagtag
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