Mangifera indica (mango): 123217316
Help
Entry
123217316 CDS
T07684
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123217316
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123217316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
123217316
NCBI-ProteinID:
XP_044494196
LinkDB
All DBs
Position
5:20570539..20577387
Genome browser
AA seq
870 aa
AA seq
DB search
MKYKQRLITAAKIILEDDARGGLLCGNSTDFGVTATLKLHQTEGIRWLIRRYLLGVNVIL
GDEMGLGKTLQAIALLSYLKMNQMSPGPFLVLCPLSVTDGWVSEMAKFAPKLKVLKYVGE
KEHRRSLRKTMYEQVIEKSSLSDVSSLPCDILLTTYDIALVDQDFLCQIPWHYAIIDEAQ
RLKNPSSILYKVLRERFVIPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLEEFLSTFN
EAGHCLSAKGGFRSLKCILHAFMLRRTKSELIKSGSLRLPPLTEITTMAPMVSLQKKVYT
SILRKELPKLLALSSGGVSNHQSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASG
KLVILDQLLQKLYASKHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEERFAAIR
NFSASSSMRSSEANGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH
RIGQMNHVLSINLVTRHSVEEVIMRRAERKLQLSHNVVGEDVMHEEEKGKTRVEMGDLKS
VIFGLHMFDPKEINNEESDGLKLSELNTMAEMVIAMRHEKIPVEAGQKLEVSPVDLLDGS
DLGQGTSASVLFDPGLDEASYLSWVEQFKQASQISINSVLELGGRRKIPEDKNLKFEAAR
KKVEEKKLAKWEAYGYHSLSVEDPICPADGDTMSQSGSVQFVYGDCTDPSKICPSEPAVI
FSCVDNSGNWGNGGMFDALVKLSTNIADAYQRASEFGDLHLGDLHLIRINEDCDEGSINN
APQWVALAVVQTYNPRRKVPRSDISIPDLECCLSKAAFSAAQNSASIHMPRIGYQGGFDR
SMWYSVERLLRKYASIYAIKIFVYYYRRSS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaagcagaggcttataacagcagcaaaaattatacttgaagacgatgcacgt
ggaggactcttgtgtgggaattctaccgactttggtgtcaccgccacgttgaaacttcac
caaacggagggaattcgctggctcatacggagatatcttctgggcgtcaatgttattctt
ggagatgagatgggacttggaaaaactctacaagccatagctttattgagctatttgaag
atgaatcagatgtcacctgggccattcttggttttgtgtccactaagtgtgacagatggt
tgggtgtctgagatggccaaattcgctccaaaacttaaagttcttaaatatgtgggtgag
aaagaacaccggcgcagtttacgcaaaacaatgtatgagcaagttatagagaagtcctca
ttgtctgatgtatcatcattgccttgtgatatactgttgacaacatatgacatagccttg
gtggatcaggattttctatgtcaaataccttggcactatgccataattgatgaagcccag
agactaaaaaacccttccagtattctatacaaagtcctcagagagcgttttgtcataccg
agaagattgttgatgactggcacacctatacaaaataatctttccgagctttgggccttg
atgcatttttgtatgccttcagtatttgggacactggaagagttcctttctacttttaat
gaagcaggacattgcttatcagccaagggagggtttaggagtttgaaatgtatattgcat
gccttcatgctccggcggacaaaatctgaactgatcaagtctggaagtttaaggctgccg
cctcttactgagataacaacgatggctcctatggtctcgttgcaaaagaaagtgtatact
tcaatattgaggaaggagctaccaaaacttctagcactgtcttctggtggtgtttctaac
catcagtctttgcagaatatagtaatacaactgcgaaaggcatgtagtcatccttatctc
tttcctggtattgagcccgaaccttttgaagaaggagaacacctggttcaggctagcggt
aaacttgtaattttggaccaactacttcaaaagttgtatgcttctaagcatcgtgttctt
ctctttgctcagatgacccatacgcttgacattttacaggattttttggagttacgaaaa
tattcctatgagcgtcttgatggatcggttcgggctgaggagcgttttgctgcgataaga
aatttcagtgcttcatcatctatgaggagttctgaagctaatggtaatgatgcttttgtt
tttatgatctccacaagagctggtggagttggtttgaacctcgtagctgctgatactgtt
atcttctatgagcaagattggaatcctcaggtggacaaacaagctctgcagcgggcacat
cggattggtcaaatgaatcatgtgttgtctattaaccttgtaactagacacagtgtggag
gaggttatcatgcgaagagctgagaggaagttgcaacttagccataatgttgtaggagaa
gatgttatgcacgaggaagagaaaggaaaaaccagagttgaaatgggtgatttgaaatct
gttatatttgggttacatatgtttgatcctaaagaaatcaacaatgaagaatcagatggc
ttgaagttgtctgaattaaataccatggcagagatggtaattgcaatgcgccatgaaaaa
ataccagttgaggctggccagaagctcgaagtcagtccagtggatcttttggatggaagt
gatcttgggcagggaacttctgcttctgtgctttttgatcctggtcttgatgaggcttca
tatctctcatgggttgaacagttcaaacaggcatcacaaataagcattaattctgttctg
gagttgggaggtagaaggaaaatacctgaggataagaatttgaaatttgaggccgctaga
aagaaggttgaagaaaagaagttggctaaatgggaggcctatggataccattcattgtct
gttgaagatcctatatgcccagcagatggtgatacaatgtcacaatcaggctctgttcaa
tttgtttacggagattgtacggatccttcaaaaatttgtccatctgagcctgctgttata
ttcagttgtgttgataactctggaaactgggggaatggagggatgtttgatgcattagta
aaactttctacaaacattgctgatgcatatcagagggcttctgaatttggggaccttcat
cttggtgatctccatcttataagaatcaatgaggattgtgatgaagggagtataaacaat
gctcctcagtgggtggctttggctgttgtacaaacatataatccaagacgtaaagtccct
cggagtgatatatctattcctgacctcgaatgttgtttatcaaaggcggcattctcagca
gctcaaaattctgcttcaatacacatgccacgaatcggttatcaaggtggatttgatcgg
tcaatgtggtacagtgtggagcggcttctacgaaaatatgcttctatttatgccataaag
atttttgtatactattaccgacggtcatcttga
DBGET
integrated database retrieval system
