Mangifera indica (mango): 123217684
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Entry
123217684 CDS
T07684
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like isoform X1
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123217684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123217684
Spliceosome [BR:
minc03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
123217684
Complex B
123217684
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
123217684
NCBI-ProteinID:
XP_044494719
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Position
5:16505309..16508718
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AA seq
201 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
TAAYQVGAAYNQHVMAQRPRPPVLPTPVMPIPGGAQLNPALFPGVRPPVIPRPIPGPPGY
VSAPGMPPMVAPPVPGQVNGLPRSPAVLNPTAVLGSAAPPASSTGAPTMATHSPYQSNSS
VPTSGGFDGFNANAQPPESNH
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgtgactattgcgacacatatttgacccacgattctccatctgtc
agaaaacagcataatgcaggctacaaacataaggcaaacgtgagaagctactatcagcag
tttgaggagcaacaaacccaaagtttaattgaccagaggatcaaggaacatcttggccaa
actgctgcataccaggttggtgctgcttacaatcagcatgtaatggctcagaggccccgc
ccaccggttctaccaacacctgttatgccaattcctggaggcgctcagttaaatccagca
ttattccctggggtgaggcctcctgttataccaaggccaatacctgggccaccaggttat
gtgtctgctccaggcatgccaccaatggtggctcctcctgtacctggtcaagtgaatggt
cttcctagatctcctgctgtgcttaacccaacagcagttcttggtagtgctgcaccacct
gcttcatctactggagctcctaccatggctacacattcaccgtatcaatcaaattcatct
gttccaacgagtggagggtttgatggtttcaatgccaatgcccagcctcctgagtccaat
cattag
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