KEGG   Mangifera indica (mango): 123217889
Entry
123217889         CDS       T07684                                 
Name
(RefSeq) ubiquitin receptor RAD23b
  KO
K10839  UV excision repair protein RAD23
Organism
minc  Mangifera indica (mango)
Pathway
minc03420  Nucleotide excision repair
minc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123217889
  09124 Replication and repair
   03420 Nucleotide excision repair
    123217889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:minc03051]
    123217889
   03400 DNA repair and recombination proteins [BR:minc03400]
    123217889
Proteasome [BR:minc03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    123217889
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      123217889
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE TECR_N UBA_3 UBA_RAD5A Dsc3_N Rad60-SLD_2 Ubiquitin_4
Other DBs
NCBI-GeneID: 123217889
NCBI-ProteinID: XP_044494896
LinkDB
Position
6:4841592..4848859
AA seq 373 aa
MKLTVKTLKGSHFQIKVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKTLGSAGASSAPPASTIPSTTAPSSNSTLATETSAQAPAPNTT
TSASDAAAANENTDTYGQAASTLVSGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNP
ERAVDYLYTGIPETAEVAVPVARFPASQATETVAAGAPPVSGLPNSAPLNMFPQETLSGA
AGGGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLI
NEPIDGSEGDIFDQPEQDMPHAINVTPTEQEAIQRLEAMGFDRALVIEAFLACDRNEELA
ANYLLENAGDFED
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaagctcactgtaaagactctcaagggcagccatttccagattaaggttcagccttct
gatacggttatggccgtgaagaagaacatagaagatgtgcaaggcaaagataattacccg
tgtggacaacagttgttaattcacaatggtaaagtgttgaaagatgagacaactttagct
gataataaagtttctgaagatggttttcttgttgttatgcttagcaagagtaagacgttg
ggctcagctggggcttcatctgctccgcctgcctccactattccatcaacaactgcacca
agctccaattctactcttgcaacagaaacctctgcacaggcaccggctccaaataccacc
acatctgcttcagatgcggcagctgctaatgaaaatactgacacctatggtcaagctgct
tcaactttggtttccggaaatgatcttgagcaaacaattcaacaaataatggatatgggt
ggcggaacctgggacaaagaaactgttactcgtgcacttcaagcagcttataataatcca
gagcgagcagtggattatttatacaccggaattcctgagacggctgaagttgctgtgccg
gtggctcgctttccggctagccaggcaactgaaactgttgcagcaggagctccaccagtt
tctggattacctaattccgctcccttgaatatgtttccccaggagacactttcaggtgct
gctggtggtggacttggatccttggactttcttagaaacaatcaacaatttcaagcttta
cgttcaatggtgcaatcaaatccacagattttacagcctatgcttcaggagcttggaaag
caaaacccacagcttttaagattaattcaagaacaccaggcggagttccttcagttaata
aatgaacctattgatggctctgaaggggatatatttgatcagcctgagcaagacatgcct
catgcaatcaatgtcacccccaccgaacaggaggcgatacaacgactggaggccatgggg
tttgatagagcccttgttattgaggcatttttggcatgtgatcgtaacgaagaattggcg
gccaactacctactggaaaacgctggagattttgaggattga

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