Mangifera indica (mango): 123217936
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Entry
123217936 CDS
T07684
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
minc
Mangifera indica (mango)
Pathway
minc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123217936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123217936
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123217936
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
LRR_4
F-box-like
DUF7885
F-box
Lentiviral_Tat
FANCI_S1
DUF3630
Motif
Other DBs
NCBI-GeneID:
123217936
NCBI-ProteinID:
XP_044494961
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Position
6:3572906..3578786
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AA seq
582 aa
AA seq
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MIMESMRKKESPSSVVSTQFPDEVLERVFALLTSHKDRSSVSLVCKDWYNAERWSRTHVF
IGNCYSVSPEILARRFPNIRSVTLKGKPRFSDFNLVPQNWGADIHAWLVAFADKYPFLEE
LRLKRMTVSDESLEYVAANFQNFKVLSLLSCDGFSTDGLAAIATHCKNLTELDIQENGVE
DKSGSWLSCFPESFTSLEVLNFANMSAEVNFDALERLVSRCKSLKALKVNKSISLEQLQR
LLVCAPQLVELGTGSFSQDLTTRHYAELENAFNNCKNIQTLSGLWEATALYLPVLYPASA
NLTFLNLSYAALQSGDLAKLLVHCPSLWRLWVLDTVEDKGLEAVGSYCPLLEELRVFPAD
PFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNP
GQPDYVTNDPMDEAFGAVVKTCTKLRRLSVSGLLTDLTFEYIGTYAKNLETLSVAFAGSS
DWGMQCVLGGCPKLRKLEIRDCPFGNKALLSGLEKYESMRSLWMSACNVTMNGCRLLARE
MPRLNVEVMKEDGSDDSQADKVYVYRSVAGPRRDAPPSVLTL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgataatggagtcgatgaggaaaaaggaatctccgagctctgtcgtgtcaactcagttc
ccagacgaggtactcgagcgagtgttcgctctcttaacttcacacaaagatcgaagctca
gtctctttggtttgtaaagactggtacaacgcggaacgctggtccaggactcatgtgttt
atcggtaactgttactcggtttcgccggaaattctggctcgccggttccctaacattcgc
agcgtcactctgaaaggaaagccgagattctcggatttcaatttggtgccacaaaattgg
ggagctgatattcacgcctggctcgttgcttttgctgataaatatccattccttgaggaa
ctgaggttgaaaagaatgaccgttagtgatgagagtttggagtacgtggccgctaatttc
cagaattttaaagtgctttctcttctgagttgtgatggtttcagcactgatggtcttgct
gcaattgctacacattgcaagaatttgactgagcttgacatccaggagaatggtgtcgaa
gataaaagtggaagttggttgagctgcttccctgaaagctttacatctttggaagtactg
aacttcgccaacatgagtgccgaagtcaattttgatgcacttgagagacttgtcagtagg
tgcaaatcattgaaggcgttgaaggttaacaaaagtatttctttggaacaattacaaagg
ctacttgtttgtgctcctcagttagtggaacttggcactggttccttttcacaagatctc
actaccaggcattacgcagagctagaaaatgcgttcaacaattgcaagaatatacagacc
ttgtctggtttatgggaagcaactgctttatatctcccagttctataccctgccagtgca
aacttgacattcttgaatttaagctatgctgctttgcaaagtggtgaccttgccaagctg
cttgtgcattgtccaagtctttggcgcctttgggtcctggacacggtggaagacaaaggg
cttgaggctgttggttcctattgtccattgctagaggaactccgtgttttccctgccgat
ccctttgatgaggaaattatccatggggtcactgaagaagggtttgttgctgtgtctttt
ggctgtcggagactgcactatgtcctttacttttgcaggcaaatgactaatgctgctgta
gcaaccattgtacagaattgccctgatttcacccacttccggctttgcataatgaatcct
ggacaaccagattatgtgacaaacgaccccatggatgaggcttttggtgctgtagtgaag
acttgcactaagctccgaagactttcagtttcaggtctattaactgacttgacatttgag
tacattgggacatatgccaaaaatttggaaaccctttcagtagcttttgcaggcagcagt
gactgggggatgcagtgtgtacttggaggttgtccaaagttgagaaaacttgagataagg
gattgcccatttggaaataaggctctgctctcaggtttggagaaatatgaatccatgaga
tcactttggatgtcagcttgcaacgtgacaatgaatggttgtaggctattggcaagggag
atgcctaggttgaatgtggaggtgatgaaggaagatggaagtgatgacagtcaggctgat
aaggtttatgtttaccgctctgttgccgggccaagaagggatgccccgccttctgtactc
actctctaa
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