Mangifera indica (mango): 123218045
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Entry
123218045 CDS
T07684
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
minc
Mangifera indica (mango)
Pathway
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123218045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123218045
03009 Ribosome biogenesis [BR:
minc03009
]
123218045
04131 Membrane trafficking [BR:
minc04131
]
123218045
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
minc04147
]
123218045
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123218045
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123218045
Membrane trafficking [BR:
minc04131
]
SNARE
SNARE associated proteins
Others
123218045
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123218045
Exosome [BR:
minc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123218045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_2
AAA_22
AAA_14
TIP49
RNA_helicase
AAA_33
NPHP3_N
AAA_28
Parvo_NS1
ABC_tran
nSTAND3
DUF815
IstB_IS21
AAA_24
ATPase
Mg_chelatase
ATPase_2
Sigma54_activat
AAA_18
TsaE
AAA_7
NACHT
NB-ARC
Bac_DnaA
AAA_lid_PRS2_C
AAA_17
ATP-synt_ab
PhoH
Vps4_C
Rad17
AAA_3
NTPase_1
AAA_19
PEX6_4th
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
123218045
NCBI-ProteinID:
XP_044495178
LinkDB
All DBs
Position
6:1722931..1725500
Genome browser
AA seq
755 aa
AA seq
DB search
MTKCQKVGNRLLVEESIEDDNSVIALHPHTMKELNLFTYDTVLLGGKRKRETVCCAVADE
TCDESKIRLSKAARTNLRVKPGDRVSVHICDDVMDAERVHILPLDDTVDGITGDLFHTYL
QPYFAESYRLVQKGDLFPVKGEMGSVDFKVVETEPGKHCVVTPETEIFCEGEPVKRDDEE
RLNGVGYEDIGGVRKQLGQIRELVELPLRHPQLFKASGIKPPKGILLYGPSGTGKTLLAK
AIANETGCFFLCINGPEITSGMAGESESNLRKAFAEAEEHAPSIIFIDEIDSIAPKREKT
QGEVERRVVSQLMTLMDGMKSSARVMVIGATNRPNSMDPALRRFGRFDKEIDISAPDEVG
RLEVLQIHTKSMKLSENVNLEKVARETQGFVGADLAALCTEAALQCIRENMDRIDVEDET
IDVQILNSMNVTDQHFNTALGTSNPSALRETIVEMPKVSWEDIGGLDKVKRELQETVQYP
VEHPQMFEKYGLSPSRGVLLYGPPGCGKTLLAKAIANECKANFISIKGPELLTMYFGESE
ANVRDVFDKARRSAPCVLFFDELDSIAIHRGSRVGDAGGTTDRILNQLLAEMDGLSAKKM
IFVIGATNRPHVIDPALLRPGRLDQLIYIPLPDESSRQQIFKACLRKSPVSKDVDLAALA
KLTVGFSGADITEICQRACKFAIKEEIEKSIEREKVKNPEAMEQDSAKEVSEIKLTHFQG
AMKCARMSVSNTDLHKYQAFAQTLSPVSSSAAGGH
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtgtcagaaggttggcaataggcttcttgtggaggaatccattgaagatgac
aactctgtgatagcattgcacccacataccatgaaggagctaaacttgtttacttatgac
actgtgttgctcgggggcaagaggaagagggaaactgtttgctgcgcggttgctgatgaa
acttgtgatgaatcgaaaataaggctgagtaaggctgcaagaacaaacctgagggtgaag
cctggtgacagggtttctgttcatatttgtgacgatgtaatggatgcagagagagttcac
attctgcctcttgatgacactgttgatggcataactggggacttgtttcatacgtatttg
cagccttactttgctgagtcttaccgtcttgtgcaaaagggtgatctttttcctgtaaaa
ggagagatggggagtgtggattttaaggttgttgaaactgaacctggtaagcactgtgtg
gttactcctgagactgagattttttgcgaaggggagccggtgaagagagatgatgaggag
aggcttaatggtgttggttatgaagatattgggggtgtgaggaaacaattggggcagatt
agagagttggtggagttgccgctgagacatccacagctttttaaggctagtggcattaag
ccacctaaagggattttgctttatggaccttctggaactggaaagacattgcttgcaaaa
gctattgctaatgaaacaggatgcttctttctgtgtattaatggacctgagattacgtct
ggtatggctggtgagagtgagagtaatctcaggaaagcatttgctgaagctgaagagcat
gctccttcaataatatttattgatgagattgattcgattgctcctaaacgtgaaaagacg
caaggtgaagtggagaggagggtcgtttctcagctgatgactcttatggatgggatgaaa
tcttctgcacgtgtcatggttattggagccacaaataggcctaacagcatggaccctgca
ttgaggaggtttgggagatttgacaaggaaatagatataagtgctccggatgaagttggt
cgcctagaggttcttcaaattcatacaaagagcatgaagctttcagaaaatgtaaattta
gaaaaggtagccagggaaactcagggatttgttggggcagatcttgcagctctctgtact
gaagctgcactacagtgcattagagaaaatatggatagaattgatgtagaagatgagacc
attgatgttcagatactcaattcaatgaatgtcacagatcagcactttaatactgctctt
ggaaccagcaacccttccgctctgcgcgaaacaattgtagaaatgcccaaagtcagctgg
gaagacattggcggccttgataaggttaagagggagcttcaagagactgttcaatatcca
gtggagcatcctcaaatgtttgagaagtatggcttgtcaccttcaagaggtgttctcctt
tatggccctcctggttgtgggaaaaccttgctggctaaggcaattgcaaatgaatgtaaa
gcaaatttcataagtatcaagggtccagagctccttacaatgtattttggagagagtgaa
gccaatgtcagggatgtttttgacaaggctcgtcgctctgctccttgtgttctcttcttc
gatgaactggattctattgccattcatagaggaagccgggtaggtgatgctggtggcacc
actgacagaattctgaatcaactgttggcagagatggatggtttgtcagcaaagaaaatg
atttttgtaatcggggctaccaataggccacatgttattgatcctgcacttctaaggcca
ggtcgcctcgatcaattgatatacatacctttgccagatgagagttctcgacagcaaatt
ttcaaggcgtgcctaagaaagtctcctgtctcaaaagatgttgaccttgcagcacttgcc
aagcttacagtaggctttagtggtgctgatatcacagaaatctgccaaagagcatgcaaa
tttgcaatcaaagaagagattgagaagagtatcgaaagggaaaaagtgaagaatcctgaa
gctatggaacaggattccgcaaaggaagtttctgaaatcaagctcacgcatttccaaggg
gctatgaagtgtgcccgtatgagtgttagtaatactgatctccacaagtaccaggctttt
gctcaaaccttgagtccagtctcatcatctgctgctggtggccattag
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