Mangifera indica (mango): 123218058
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Entry
123218058 CDS
T07684
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
KO
K17302
coatomer subunit beta'
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123218058
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
minc04147
]
123218058
Membrane trafficking [BR:
minc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
123218058
Exosome [BR:
minc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123218058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_like
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
TPR_GEMI5
Clathrin
TPR_CcmH_CycH
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
123218058
NCBI-ProteinID:
XP_044495197
LinkDB
All DBs
Position
6:complement(6395000..6404225)
Genome browser
AA seq
916 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHTDYIRCIAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAVGYMKGSRRIVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ
EKKSIRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
ASDSSFYILKYNRDVVSSHLDSGRSVDEQGVEDAFELLHETNERVRTGIWVGDCFIYNNS
AWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDVERANEILPSIPKEHHNSVARFLESRGMIEEALEVATDPDYRFELAIQLGRLDIAQG
IAKEVQSESKWKQLGELAMSTGKLEMAEECMKYAMDLSGLLLLYSSIGDAEGISELASLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLHK
VNPKAAESLADPKEYPNLFEDWQVALSLESKVAETRGVYPSAADYVNHVDKSHITLVEAF
RNMQIEEEETFENGDFDHEETEQQNGEKIAEEHNEEEESQEEAVVVDADSTDGAVLVNGN
EAEEEWGTNNEGTPSA
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagacttgaaatcaagagaaaacttgcacaaagatcagagagagttaagtct
gtggatttacatccaaccgaaccatggattctggcaagtttgtattctggaactgtttgt
atttggaattaccagtctcagactatggccaagtcatttgaggtcactgagttgccagtc
aggtcagcaaagtttgtagcacgcaagcaatgggttgttgctggagctgatgacatgttt
attcgtgtatacaattacaatacaatggacaaaattaaagtatttgaggcacatacggat
tatattaggtgcattgctgtccatcctacccttccatatgtgctgtcatcatctgatgat
atgctcataaaactatgggactgggagaagggttggatgtgtactcagatatttgaggga
cattctcactatgttatgcaagtaacatttaatcctaaagataccaacacctttgccagt
gcatcccttgatcgcactataaagatttggaaccttggttcccccgaccccaattttaca
ttggatgcccatcagaaaggagtaaactgtgttgattattttactggtggtgataaacct
tatctgatcactggttcagatgatcatactgctaaggtgtgggattatcaaaccaaaagt
tgtgtccagacactagagggccacactcacaatgtctctgcagtttgttttcatcctgag
ctccctattatcataactggttctgaggatgggactgttcgcatttggcatgcaaccaca
tataggcttgaaaacacattgaattatggtcttgaaagagtttgggcggttggatatatg
aaaggttcacgcagaattgtaattggttatgatgaaggaactattatggtgaaaattggc
cgtgaagaacctgtagctagtatggataatagtggaaagatcatatgggccaagcataat
gaaattcaaactgtgaacatcaagagtgtgggggctgattttgaggtaactgatggagaa
agattgcctttggctgttaaggagttgggaacctgtgatctttatccacagagcttaaag
cacaatccaaatggaaggtttgttgttgtctgtggagatggcgagtacattatttataca
gctttggcatggagaaataggtccttcggttcagcactggagtttgtttggtcctctgat
ggagaatatgctgttagagaaagctcatccaagattaagatatttagtaaaaactttcag
gaaaaaaagagtatcagaccaaccttctcagctgaacgtatctatggaggaacattgttg
gcaatgtgctcaaatgattttatctgcttttatgattgggctgagtgcaggttgattcgg
cggattgatgttactgtgaaaaatctctattgggctgacagtggtgatttagtggcgatt
gccagtgactcatcattctacatcctgaagtacaatcgggatgtagtttcatctcattta
gatagtggaagatcagttgatgaacaaggtgttgaggatgcatttgagcttcttcatgaa
accaatgaacgtgttaggactggtatatgggttggggattgtttcatttacaacaactct
gcctggagactcaattactgtgttggtggtgaggtaacaactatgtttcatttggaccgc
cctatgtatttgttgggataccttgctagtcaaagccgtgtgtatctaatagacaaggag
ttcaatgttatgggatacacactgcttctgagtttgattgagtacaaaactcttgtgatg
cgtggagatgtggagagagctaatgaaattttaccttcaattccaaaagagcatcataat
agtgtggctcgtttcttggagtcacgaggaatgattgaggaagctttggaagtggctact
gatcctgattatagatttgagctagctatacagcttgggagattggacattgcacagggt
attgccaaagaggtgcagagtgagtcaaaatggaagcaattgggagaattagctatgtct
actggaaagttagaaatggctgaggagtgcatgaaatatgcaatggatttgagtggttta
ttgctgctctactcttccataggagatgctgaagggatatcagaacttgcttccctggca
aaagagcaagggaagaacaatgttgctttcctttgtttattcatgttgggtaaattggaa
gactgcctccagctgttggtggaaagcaatcggatacctgaggctgctttgatggcacga
tcataccttccaagcaaggtttcagagattgttgctatttggagaaaagacctgcataag
gttaatccaaaagctgctgaatctctggctgatccaaaagagtatcctaacttgtttgag
gattggcaagttgcactttccctggaatctaaagttgctgagactaggggtgtgtatcct
tctgcagcagactatgtgaaccatgttgataaatcacacataacccttgtggaggctttc
agaaacatgcaaattgaagaagaggaaacctttgaaaatggagacttcgatcatgaggag
actgaacaacaaaatggagaaaagattgcagaggaacataatgaagaagaagaaagccaa
gaggaggctgttgtggtggatgctgattctactgatggtgctgtactcgttaatggtaac
gaggctgaagaagagtggggtacgaataatgagggaaccccgtcagcctaa
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