Mangifera indica (mango): 123218128
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Entry
123218128 CDS
T07684
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
minc
Mangifera indica (mango)
Pathway
minc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123218128
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
minc01002
]
123218128
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123218128
03036 Chromosome and associated proteins [BR:
minc03036
]
123218128
03400 DNA repair and recombination proteins [BR:
minc03400
]
123218128
Peptidases and inhibitors [BR:
minc01002
]
Metallo peptidases
Family M67
123218128
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123218128
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
123218128
BRISC complex
123218128
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
123218128
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
123218128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
123218128
NCBI-ProteinID:
XP_044495295
LinkDB
All DBs
Position
6:complement(5850877..5857873)
Genome browser
AA seq
435 aa
AA seq
DB search
MSLTAVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGNVTALIWGASPQSRSDRR
KDRVETNPEQLAAASAQADRMTVLTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFVGLIFSCFSEDINKVGRIQVIAFQSSDGKQNRMSRPISLSPINKNAVIDLESSLSSS
ENLSVRSGSARAESPEQDTVDSRSATGSWKVVGRSSDLGGFFANADANHLERERVGGNNQ
TGDLSITIADIDPMDISESMQEAMHRSNLDMSGAEYVRKEISLHVLPTSSLLKLDSPLTS
FTDLQHVLYQEERAAYNQAILQNMRDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAINAL
QDRLRENEIRLAMLTNQAKMLETDASRGSESGSSPHHTQSHGVSGSALVGQRDVHSSANV
RTIRNPGSGSKKGGS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacagccgtcaaaatgtctgaggatgtttggttaacttgtcttactcacgca
ttgtccactgagactgaagagatcatgggtcttcttcttggtgatatcgagtactcaaaa
aatggtaatgtcactgcactaatttggggagcctcacctcagtcacgatctgatcggcga
aaggatcgagtagagacaaatcctgaacagttggctgctgcatcagcgcaggctgataga
atgaccgtgttgactggaagaacgacaagagtcattgggtggtaccattcacatccgcat
attacagttcttccttcccatgttgatgtgcggactcaagcaatgtatcaacttctagat
tctgggtttgttgggcttatattttcttgttttagtgaagatataaataaggttggaaga
atccaagttattgcatttcagtcctcagatgggaagcagaatcgcatgtcaagaccaatt
tcattatctcccattaataaaaatgcagttattgatttggaatcatctttaagttcctca
gagaatctatcagtaagatctggaagtgcaagggctgagagccctgaacaagacactgtt
gattctagatcagcaacaggatcttggaaggttgtgggaagatcttcagacttgggtggt
ttctttgcaaatgctgatgccaaccatcttgagagagagagagttggaggaaacaaccaa
actggtgatttaagtatcaccattgctgatatagatcccatggatatatcagaaagcatg
caagaggccatgcaccgttcaaatttggatatgagtggtgcagagtatgttaggaaagaa
atctcacttcatgttttgccgacctcatctcttctgaaacttgattcacctctaacgtca
tttacggatttgcaacatgtactatatcaggaggaaagagcagcttataaccaagctata
ttgcaaaatatgagggatggaaaagtgcatccccttactttcattcatcacacatctaca
tatcaggcttcaatgtgcaaattaattgaatattgtttaagtcctgccataaatgcacta
caggatcgattgagagagaatgaaattcggttggcaatgctgacgaatcaagcaaagatg
ttggagactgatgcctctagggggagtgaatccggttcatctccccatcatactcagtct
catggtgtcagtggaagcgctttggttggtcagagggacgtgcatagctcagctaatgtg
aggaccatacgtaatcctggtagtggcagcaaaaaggggggttcgtaa
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