Mangifera indica (mango): 123218249
Help
Entry
123218249 CDS
T07684
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123218249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123218249
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123218249
mRNA degradation factors
5'-3' decay
Lsm complex
123218249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
123218249
NCBI-ProteinID:
XP_044495478
LinkDB
All DBs
Position
6:9525176..9527554
Genome browser
AA seq
177 aa
AA seq
DB search
MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLESACERVIVGDL
YCDIPLGLYVIRGENVVLIGPGEGGASSTYDSCFSCRNSKCTESREGGNRSQRYNKEKNG
VPGFGLASCTQSSANIRRSGVQENPFIVGVNSLKSLNNFLEECFMICHLVCSTDFVG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggcccagatgacgtttatctctctacttctcttgctagttacttagac
aagaaacttcttgtattgcttcgtgatggtcgaaaacttatgggtacactttgttcattt
gatcaatttgccaatgctgttcttgagagtgcatgtgagagagttattgttggtgacctt
tactgcgatatcccattaggtctatatgtaatccgtggggagaatgttgttttaattgga
cctggagagggaggagcttcctccacatatgactcatgtttcagttgcagaaattcgaaa
tgcacagaaagcagagagggaggcaacagatctcaaaggtacaataaggaaaagaatgga
gttcctggatttggactagcttcctgcacccagagttccgcgaatattaggcggtcgggg
gtgcaggagaatccattcatagtgggtgttaactctctgaaatcattgaacaattttcta
gaagaatgctttatgatttgtcatttagtctgtagtactgattttgttggttga
DBGET
integrated database retrieval system
