KEGG   Mangifera indica (mango): 123218317
Entry
123218317         CDS       T07684                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
minc  Mangifera indica (mango)
Pathway
minc03420  Nucleotide excision repair
minc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123218317
  09124 Replication and repair
   03420 Nucleotide excision repair
    123218317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:minc04121]
    123218317
   03400 DNA repair and recombination proteins [BR:minc03400]
    123218317
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:minc04147]
    123218317
Ubiquitin system [BR:minc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     123218317
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123218317
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123218317
Exosome [BR:minc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   123218317
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 123218317
NCBI-ProteinID: XP_044495636
LinkDB
Position
6:complement(1229031..1236156)
AA seq 809 aa
MSLPSKRAISNASNTTSHSSSMKKAKSQAVDPAKNGLHHHDFSNTNNNPQNDVVFDPSSM
ALDEDLKTGDSRSPAAANLGRKKAQPPQPAKKLVIKLVKAKPTLPSNFEEDTWAKLKSAI
KAIFLKQPDSCDLEKLYQAVNDLCLHKMGGNLYQRIEKECETQISAALQSLVGQSPDLAV
FLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLHLFRKYLSSYSEVEH
KTVTGLLRLIERERLGDAVDRTLLNHLLKMFTALGIYTESFEKPFLERTSEFYAAEGMKY
MQQSDVPDYLKHVEIRLHEEHERCVLYLDVGTRKPLIATAERQLLERHVSAILDKGFTML
MDGHRTEDLQRMCVLFLRVNALESLRQALASYIRRTGHGMVMDEEKDKDMVSSLLEFKVS
LDTIWEESFYKNEIFCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEG
TLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKL
EGMFKDIELSREINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVY
QDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSF
QDIRDATGIEDKELRRTLQSLACGKVRVLQKLPKGREVEDDDSFVFNEGFTAPLYRIKVN
AIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPG
DLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgtctctccccagcaaacgcgcaatcagcaacgcgtccaacactaccagtcactcctcc
tccatgaagaaggccaagtctcaggccgtcgaccctgccaagaacggtcttcaccaccat
gactttagtaataccaacaataaccctcaaaacgatgtcgttttcgacccgtcttctatg
gccctcgacgaggatcttaaaaccggcgactctcgttcccccgcagccgccaatttggga
cgcaagaaagcccagccgcctcagcccgctaagaagcttgtcatcaagcttgttaaagct
aaaccaacactgccatcaaattttgaggaggatacatgggcaaagcttaagtcagctata
aaagctatattcttgaagcaaccagattcttgtgacttagagaagctgtatcaggctgtc
aatgatctttgcctgcacaagatgggaggaaatctttatcaacggatagaaaaggagtgt
gaaacacagatatctgcagcacttcaatcattggttggccaaagcccggatttggcggtt
ttcttatcacttgttgagagatgctggcaggatctttgcgatcagatgttgatgattcgt
ggtatagccttgtatctagatagaacatatgtgaaacaaacacccaatgtgcgctcattg
tgggacatgggcttgcatcttttccggaaatatctctcttcatattctgaagttgagcat
aaaactgttactggccttttgagactgattgagagagaaaggttaggtgatgctgttgac
aggactcttctaaatcatcttttgaagatgtttactgctttaggaatttacacagaaagc
tttgaaaagccatttcttgagcgtacctctgaattttatgctgcagaaggcatgaaatat
atgcagcaatcggatgttccagattatttgaagcatgtggagataagattgcatgaagaa
cacgaaagatgtgtactttacttggacgtgggtacaagaaagccacttatagcaactgca
gaaagacaacttcttgaacgccacgtatccgcaattcttgacaaggggttcacaatgctg
atggatgggcatcgtactgaggaccttcagaggatgtgtgtgctgtttttgcgggtgaat
gcccttgaatcattaaggcaggctcttgcctcatatattcgaagaactgggcatggcatg
gttatggatgaagaaaaagataaagatatggtttcctcccttttggagtttaaggtgtcc
cttgacacaatatgggaggaaagcttttataagaatgaaatattttgcaataccataaag
gatgcttttgagtatctaattaatttgcgtcagaaccggcctgctgagttgattgcaaag
tttctagatgagaagcttcgagctgggaacaagggtacttccgaagaggaattggagggt
acacttgataaagtgttagttttattcaggtttatccagggtaaggatgtgtttgaagca
ttctataagaaggatcttgcaaaaaggttactgttggggaaaagtgcttctattgatgct
gagaagtctatgatttctaagctaaagactgaatgtggcagccagtttacaaacaaactt
gaaggaatgttcaaggatattgaattatcgagggagataaatgagtccttcaaacagtcg
tcccaggcccggacaaaactgccatcagggattgagatgagtgttcatgtcttaacaaca
gggtactggcccacatatcctcccatggatgttaggctacctcacgaactgaatgtttat
caggacatttttaaggagttctacttaagcaagtacagtggaaggcgcttaatgtggcaa
aattcactaggtcactgtgtgttgaaggcggagttcccaaaaggtaagaaggagctggca
gtttccctattccagacagtggttttgatgctttttaatgatgcccaaaagcttagcttt
caagatattagggatgccacaggcatagaggacaaggaattaagaaggactctacagtcc
cttgcgtgtggtaaagttcgtgtcctgcaaaagttgccaaaagggagggaagtcgaggat
gatgattcatttgtattcaatgaaggatttactgcccctctttatcgtattaaggttaat
gcaatccagatgaaggaaacagtggaggagaacacaagcactactgagagagtatttcag
gatcgtcaatatcaggttgatgctgcaattgtgcgaataatgaagaccagaaaagtgcta
agtcacacgcttctgataaccgagctcttccaacagctcaaatttcccataaagcctggt
gaccttaagaaaaggattgaaagcttgatcgaccgggaatacctggagcgtgacaagaac
aacccacagatatacaattacttggcctag

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