Mangifera indica (mango): 123218627
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Entry
123218627 CDS
T07684
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123218627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123218627
03041 Spliceosome [BR:
minc03041
]
123218627
03032 DNA replication proteins [BR:
minc03032
]
123218627
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
123218627
Spliceosome [BR:
minc03041
]
Complex A
U1 snRNP components
Sm proteins
123218627
U2 snRNP components
123218627
Complex B
U1 snRNP components
123218627
U4/U6.U5 tri-snRNP components
123218627
Complex C
U2 snRNP components
123218627
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
123218627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
123218627
NCBI-ProteinID:
XP_044496073
LinkDB
All DBs
Position
6:4730930..4733220
Genome browser
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLKIEGRIIGFDEYMNLVLDDAEEV
NIKKKSRKSLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaccaaagttcagaggatcatgactcaacctattaacctgattttcaggttt
ctccaaagcaaagctcgcattcagatctggctgtttgagcagaaagatttgaaaatcgaa
ggccgtatcattggatttgatgagtacatgaatttggttttggatgatgctgaagaagtt
aacataaagaagaagagtaggaagtcactggggaggatactcttgaagggagacaatata
actcttatgatgaatacggggaaatga
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