Mangifera indica (mango): 123218725
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Entry
123218725 CDS
T07684
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123218725
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123218725
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
123218725
NCBI-ProteinID:
XP_044496244
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Position
6:complement(17405627..17416099)
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AA seq
1140 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPENDIFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDASQIGLDLDEEL
LRVTASGHDAVSNADPQGSVKSLTPWEEDNIGERINETSEATAMNDNVNQLERLGVHAES
LEYAEAPSTPGLVQEPNLSCVQEAQASDDHLESEDHNSNELVATVNGNHIGGLEVKHAEP
LRDSVNLMPMVLEYSERTIGALDGSDRMENMQNASVGGNVPNMISVQQGVRSDETAASPC
CFHVTSQELSHRTCPDSTNDVSEGDLMDGQGSIRTKIQSDAEISENVPMSAAPAIVDAEG
HASREPKDTTAANKPGDLEEMSSNVLKPCSSHLSQPDMSSPGYGHYVEIHSSETSRRAPV
EVQGEECHVTDILQSEKDQISGPSICGEIDADNKKSDELLDNVVSNDQLENLNNSTSLEL
PEPEKLLSVPEGSLDKPNDLLVDSTPEKALVGSDGVDAGIKLVSGKKRSYTESTLTVESL
NSSESFGAARYKRTSESIPDDDDLLSSILVGRKSSVLKLKPTPPAPEVPSRKRTRSVPQT
SALKRKVLMDDTMVLHGDIIRQQLTNTEDIRRIRKKAPCTCPEILMIQIQFLENEIFSEP
IFTGMSAELMSLLCETPDLSRIRVSETDENHGSSEPAKDVECSFRSNVEDGEDGSKYPEV
HVEAQLAETFISGHVLGSHDIDARGGTNAITDAPELEAVQNEPLAEVTEMDIDRANVEVA
ETANFSAEINCPIEIQNMPDEDKTNGAYASLQIDTLGITPEQKLDIKPVGDNATLVDTSN
GKVVDAVEGEDTVAIDTELKARDELPLKEGKVGVFVQNEGDGLTDFTANGVMNEDGFQSA
DLGCDRLDPNSNLVYGEEPLIDPTNSVKHDTELKDTSLNDEENPIFVDADHPAAEDRGEL
EGITVEHDTEFLNVDDDEVAEDHDDRDGCPEDTRLLENSGWSSRTRAVAKYLQTLFEEPV
HGRKLLALDNLLSGKTRKEASRMFFETLVLTTKDYIQVEQPKPLENINIKPRAKLIKSDF
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacagtttattttggccaagaaagggcctttagggacaatatggatcgct
gctcatttagagaggaagcttcgaaagaatcaggtggctgatactgatattggagtctca
gtagactcaattctttttcctgaagtaccaattgcacttagattgtccagccatcttttg
cttggtgtggtgaggatatattctagaaaggtgaattaccttttcgatgattgtagtgag
gcattgcttaagataaagcaagcttttcgctcaactgcagttgatttgccgccagaagaa
tcgactgcgccttatcactctatcacattgccagagacttttgatcttgatgattttgag
ttgccagagaatgacattttccagggtaactatgttgatcatcatgtcagtacaagggag
caaattaccctccaagataccatggatggtgtggtttattccacatctcagtttggattg
gatgagcgttttggtgatggtgatgcatctcagattggtttagaccttgatgaggagcta
ttaagggttacagcttcagggcatgatgctgtttcaaatgctgatcctcaggggtctgtc
aaatcgttgacaccttgggaagaagataatattggtgagcggataaatgaaacttcagaa
gccacggcaatgaatgacaatgtaaatcagcttgaaagacttggtgtccatgcggaatct
cttgagtatgctgaagcaccatctactccaggattggtacaagagccaaatttgtcctgc
gtgcaggaggctcaggccagtgatgatcatttggaatcagaagatcacaattctaatgag
ttagtggctacggtgaatggcaaccacattggaggtctggaggtcaaacacgcggagcca
cttcgtgactctgtcaacttgatgcctatggttttagaatactcagagcggaccattggt
gcattagatggttcagacaggatggaaaacatgcaaaatgccagtgtaggtgggaatgtc
ccaaatatgatatctgtacaacaaggagttaggtcagatgaaactgctgcatctccttgt
tgctttcatgtcacctcacaggaactgagtcacagaacctgtccggatagcaccaatgat
gtatcagaaggtgatttgatggacggtcaaggttcaatcaggactaaaattcaaagtgat
gctgaaatttctgagaatgtacccatgtctgccgcaccggcaattgtggatgcagaaggc
catgccagtcgggaacctaaggatacaacggctgcaaacaagcctggtgatcttgaagag
atgtcatccaatgtgttaaagccatgcagctcacacctgagtcaacctgatatgtcttct
cctggttatggacattatgttgagatacactcatcagagacatctagaagggctcctgtt
gaggtgcaaggtgaagagtgccatgttacagacattttgcaatcagagaaagatcagata
tcagggccttctatatgcggggaaattgatgcagataacaagaaatcagatgaacttttg
gacaatgtggtctccaatgatcagttagaaaatttgaacaattctacgagtttggagttg
cctgaaccagaaaagctactctctgtaccagaggggtctcttgataaaccaaatgatttg
cttgttgattccactccagagaaagctttagtggggagtgatggggttgatgctggaatc
aaacttgtgtcagggaaaaaacgtagttacacagaaagtacactaactgtagagagttta
aactcatctgaatcctttggggcagccagatataagagaacttcggagtccattcctgat
gatgatgatttgttatcatctattctagttggaagaaagtcttcagttttaaaattgaag
cccacgcctcctgcccctgaagtaccatctagaaaaagaacccgttctgtgcctcaaact
agtgctttgaagagaaaggtgctgatggatgacaccatggtcttgcatggcgatataata
cgccaacaattgacaaatactgaagacatacgccggatacgaaaaaaagctccttgcact
tgccctgaaattttgatgattcagatacagttcttggagaatgaaatattcagtgaaccc
atatttacaggtatgtcagcagaattgatgagtttgctctgtgaaacacctgatctgagc
agaatcagggtttcagaaactgatgagaatcatggttcttctgaaccagcaaaggatgtg
gagtgctcatttaggtctaatgttgaagatggagaggatgggagcaaatatcctgaggtt
catgttgaagcacagcttgcagagactttcattagtggccatgtcttaggatctcatgat
attgatgctcgagggggtacaaatgctattactgatgcacctgagcttgaagcagtgcaa
aatgaacccttggctgaggtaactgaaatggacattgacagagctaatgttgaagttgct
gagacagctaatttctctgctgagattaactgtcctatagaaattcagaacatgcctgat
gaagataaaaccaacggtgcatatgcttctcttcagatagatacattgggcattacacct
gagcagaaattggatattaaacctgttggagacaatgctactttagtggatacaagcaat
gggaaagtagttgatgctgttgaaggagaagatactgttgcaattgatactgaattgaaa
gcaagggatgaacttcccctgaaggaaggcaaagttggggtgtttgttcaaaatgagggt
gatggcctgacagattttaccgcaaatggtgttatgaatgaggatggtttccagtctgca
gatttgggttgtgataggttggacccaaactcaaaccttgtatatggtgaagaacctctt
atagatcctacaaattcagttaaacatgatacagagttgaaagacacttcattgaatgat
gaagaaaacccaatctttgtagatgctgaccatcctgctgctgaagatcgtggtgaactt
gaaggcatcacagttgagcatgatacagaatttctgaacgtagatgacgatgaagtagct
gaagatcatgatgacagggatggctgtcctgaagacactcgccttcttgagaatagtgga
tggtcttcccgcaccagggctgttgccaagtacttacaaactctatttgaggagcctgta
catggaagaaagcttctggccttggacaacttattatctggtaaaactcgcaaggaagca
tcgagaatgtttttcgaaacactggttctgacaacaaaggattacatccaggtagaacag
ccaaagcccttggagaacattaacataaagccgcgagcgaagctcataaaatcagacttt
tga
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