Mangifera indica (mango): 123218751
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Entry
123218751 CDS
T07684
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123218751
03400 DNA repair and recombination proteins [BR:
minc03400
]
123218751
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
123218751
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
123218751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
Y4lR_2nd
Motif
Other DBs
NCBI-GeneID:
123218751
NCBI-ProteinID:
XP_044496291
LinkDB
All DBs
Position
6:complement(228831..242484)
Genome browser
AA seq
1678 aa
AA seq
DB search
MPGELEQQLKEVGSKLDTPPSNKDALVKLLKQAATCLSELDQSPPASMLEAMQPFLNAIV
KPVFLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDTFQLIVGTFSGLKDISGPSF
GRRVVILETLAKYRSCVVMLDLECDDLVNQMFSTFFNVASDDHPENVLSSMQTIMIVLLE
ESEDIQEDLLLVILSALGHNKSDTPRRLAMNVIKQCAGKLESGIKQFLVSSMSGDSRLEN
SHIDYHQVIYDVYRCAPQILSGVVPYLTGELLTEQLDTRLKAVQLIGDLFALPGSFNTEA
FQPIFLEFLKRSTDRVVAVRMSVLDHVKSCLLSDPFRAEAPQIRSVLCDRLLDYDENVRK
LVVAVICDVACQALNSIPVETLKLVAERIRDKSLLVKIYTLERLAEVFRVYCLRSSEGLV
DQNEFDWIPGKILKCFYDRDFRSDTIESILSGSLFPTEFSVKDRVRLWVRVFSGFDRVEM
KALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKVLFCFRVMSRSFAEPTKAEENF
HILDQLKDVNIWKILMNVLDPKISFHQACSSRDDLLKILGEKHRLYDFLRTLSMKCSYLL
FNKEHVKEIFLEVAIQKASGNAQYTQSCMDILGILARFSPFLLGDTEEELVNLLKDDNEI
IKEGVLHVLAKAGGTIREQLAQSSSSVDLVLERLCLEGSRRQAKYAVHALAAITKDDGLK
SLSVLYKRLVDMLEERTHLPSVLQSLGCIAETATAVFETRESEIVEFIKSKILECSNKKE
DNEVSWDDRSELCLLKIYGIKTLVKSYLPVKDAHLRPGIEELLGILRNMLSYGEVSEDSE
SSSVDKAHLRLTSAKAILRLSKHWDQKIPVDVFHLTVRTPEISFPQAKKLFLSKVHQYIK
DRLLDAKYASAFLFGITESKPLDFEEEKQNLADVIQMKPRQISGQSDAISLTAYPEYILP
YVVHTLAHHSCPNIDECKDVKAFELVYRRLYLIISVLIHKDEDVKSEASNNKEKEITSPL
ISIFHSIKWSEDTVDAAKSKNSHAICDLGLSIIKRLSLKEDDIQEMISSISLPPMLYKPY
EKKEDDNSRTSEGQTWLTDKTILTHFESLKLEPDEPVCEEIAEDEALKDDERDGNEVPLG
KMIQRIKSQGGKTGKAKKKKSSLAEVNNAGNDFDILKMVREINLDNLGSSNKFESSNGHK
HSPSKKINFDLDHQESKKRKTTDAVSISVPKRRRSSSAFSGFKSPKSASKGSLRVSGDDS
FEAKVSSYSSIKMDTDIHDSEGRKSMEKKQFKNSKSGLLAVGSQRRRTFSSKWKGKGSDT
DHDDEANEVGESDDDEDMKKPDLLMETDGTSPNGNSKSPAGSTKKRKRRSIAGLAKCTTK
NRGVNIEDLIGYRIKVWWPLDKEFYEGTVKSYDPIQQKHVILYDDGDVEVLRLHKERWEL
LDNSRKPTKKSKSTSRKSAPSAEVSLGLKDKNSGGSRQDKKSTKIVKGKRTPKKGLKHGP
KSASKNRFSEDEDEGKAKFSDRKHTRVSKIPKMKNSGDFEDEQAAMADENLIDREESDQE
VKSVSEGRSLEDAESPNHAEESDEEDRLNSEEKLAEDMETAPEEETKIDEDEEVDESGKG
TREEANEDKSDTEENKEVGDGGTSPANLEKDDAAELSDDEPLSKWKRKVGKSGSRGAA
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagagctcgaacaacagctgaaggaggttggatcgaagctcgacacgcctcct
tctaacaaagacgctctcgtcaagctcttaaagcaagctgcaacatgtctttctgagttg
gaccaatctccaccggcttcaatgttagaggctatgcagccttttcttaatgcaattgtc
aagccagtatttctgaagcatcaagataaggatgttaagcttctagtagcaacctgtatt
tgtgagatcaccaggattactgcacctgaagctccctacagtgatgatgttctcaaggat
acctttcagttgattgtgggtacctttagtgggttaaaggacatcagtggtccatcattt
gggaggagagttgtcattctggagactcttgcaaaatataggtcatgtgttgtgatgctg
gatcttgaatgtgatgatctagtgaatcaaatgttcagtacatttttcaatgttgccagt
gatgatcatccagaaaatgttctatcatcaatgcaaacaatcatgattgttctattagaa
gaaagtgaggatattcaagaagatcttttacttgttatattgtctgcgttaggtcataac
aaaagtgataccccaaggaggcttgctatgaatgttataaagcaatgtgctggaaaactt
gaatctggcataaaacaattccttgtgtcatcaatgtcaggcgatagcaggctagaaaat
agtcatattgactaccatcaagttatttatgatgtttatcgttgtgctcctcagatctta
tcaggagttgttccatatctcaccggagagttgctgactgagcaactagacactcgttta
aaagcagtgcaattaatcggagatctgtttgctctgcctgggtcttttaacacagaagcc
tttcagcctatctttttggagttcctgaaaagatcgactgacagagtagttgctgttcgt
atgtctgtccttgatcatgtcaagagctgcctactgtcagatccttttagggctgaggct
cctcaaatacgttctgtcctctgtgatcggctgttggactatgatgaaaatgtacggaag
ctagttgttgctgttatttgtgatgtggcgtgccaagctctgaattctattcctgttgag
actctgaaactagttgcagagcgtattcgagacaaatctctacttgttaaaatatatact
ctggagaggctggctgaggttttcagagtatattgcctgaggtcctctgagggtttagta
gatcagaatgaatttgattggattcctgggaagattttgaaatgtttctatgacagagac
ttcagatctgatacgattgaatctattttatctggttccttgttcccaacggagttctct
gtaaaagatagggttagactttgggtgagagttttctcaggctttgacagagttgagatg
aaggctcttgagaagatacttgagcaaaaacaacggttgcagcaagagatgcagaggtat
ctctcccttaggcagatgcatcaggatggggatgcccctgagatccaaaaaaaagtattg
ttttgcttccgagtcatgtctcgttcatttgctgagcctacaaaagctgaggagaatttt
catattcttgatcaattgaaagatgttaatatctggaagatattgatgaatgttcttgat
ccaaagattagctttcatcaagcttgttctagtcgggatgatttgcttaaaatacttggt
gaaaaacaccgactctatgatttcctgcgtactctttctatgaaatgttcttatttactt
tttaacaaggaacatgtgaaagaaatttttctggaggttgccatacaaaaggcttctgga
aatgcacaatatacgcaatcttgcatggatatactagggattcttgcacgcttcagtcca
tttttgctgggtgacaccgaagaagaactggtaaatttactgaaagacgacaacgaaatc
ataaaagaaggtgtcttgcatgttttagcaaaagctggtgggaccatccgagaacaactt
gcacagtcatcaagttctgttgacctggtactggagaggctctgtttagaaggtagtcga
aggcaggccaagtatgctgtacatgcactagcggcaataacaaaggatgacgggctcaag
tctctctctgttttatacaagaggcttgtagacatgttggaggagaggactcatttgcct
tctgttctacaatctctgggatgtattgctgagactgcaacagcagtttttgaaactaga
gagagtgaaattgtagaattcataaaaagcaagattcttgagtgcagcaataaaaaagaa
gacaatgaagtatcttgggatgacagaagtgaactttgtttattgaagatttatggaatt
aaaacattggtcaagagctatttgcctgtcaaagatgcccatcttcgacctggtattgaa
gaacttctgggaattcttagaaacatgctttcttatggtgaagtgtcagaagattcagaa
tcaagttcagttgacaaagcccatttgaggcttacttcagcgaaggcaattcttcgtttg
tcaaagcactgggatcagaagattcctgttgatgtgttccacttgactgtgaggactcca
gagatatctttccctcaagctaagaaattattcctgagcaaagttcatcaatatataaag
gaccggcttttggatgcaaaatatgcttctgcattcttatttggtataactgaatctaag
ccacttgactttgaagaggagaaacagaacctggctgatgtcattcagatgaagccacga
cagatctctgggcagtctgacgcaatttcattgacagcatatcctgaatatattctccct
tatgtggttcataccttagctcatcattcatgtccaaatatagatgaatgcaaggatgtc
aaagcatttgaattggtataccggcgactttacttaattatttctgtattgattcataaa
gatgaagatgtcaagtcagaggctagtaacaacaaagagaaggagattacttctcctcta
atctctatatttcatagtattaagtggtcagaagacacagttgatgcagcaaagtcaaag
aattcacatgctatttgtgaccttgggttgtcaatcataaagcgtttatcactaaaggag
gatgatatacaagagatgatttcatccatctctctgcccccaatgctgtacaaaccatat
gagaagaaagaagatgataactctcggacaagcgaagggcaaacatggttgactgacaag
actatcttaactcactttgaatcgctcaagttagaacctgatgaacctgtttgtgaagaa
attgctgaggatgaggctctgaaagatgatgaaagagatggaaatgaagtgcctctgggg
aagatgatacagcgtataaagtctcagggaggcaagactggaaaggccaaaaagaaaaag
tcttcattggctgaagtgaataatgctggaaatgattttgatatacttaaaatggtgagg
gagataaatctggataatctggggagctctaataaatttgaatcaagcaatggtcataaa
cattctccaagcaagaaaattaattttgatctggatcatcaagaaagtaaaaaaagaaaa
accactgatgcagtatccatatcggtacctaagcggcgaaggtcatcatctgcttttagt
ggtttcaaatctccaaagagtgcttcaaagggttctttgagagtttctggcgatgattct
tttgaagcaaaggtttcttcgtattcatccatcaaaatggataccgacattcatgattca
gaaggcagaaaatctatggagaaaaaacagttcaaaaacagcaagtcaggtttgttggca
gtggggtcccaaaggaggagaaccttctcatcaaaatggaaagggaaaggttctgataca
gatcatgatgatgaagcaaatgaagttggggaatcagatgatgatgaggatatgaagaag
cctgatttactgatggaaactgatgggaccagtccaaatggtaattcaaagtctcctgct
ggatctaccaagaagcgtaagagaagaagcattgctggattggcaaagtgtacaacaaag
aatcgtggagtaaatattgaagacttgattggttacagaataaaagtttggtggcccttg
gataaggagttttatgaaggcactgttaaatcttatgaccctatacaacagaagcatgtg
atactatacgatgatggagatgtggaagttctgcgtttacataaagaacgatgggagctc
ctagacaacagtcgcaagcctacaaagaagtcaaagtcaacttctaggaagagtgctcct
tctgcagaagtatcacttgggctgaaagacaaaaattcaggtggttcacggcaggataag
aaatcaacaaagatagttaaagggaagagaactccaaaaaaaggcttgaagcatgggcca
aaaagtgcatcaaagaacagattcagtgaagatgaggatgaagggaaagctaaattttca
gaccgtaaacacacgagagtgtcgaagattcctaagatgaagaactcaggtgattttgaa
gacgaacaagctgccatggcagatgagaatcttattgacagagaggaatctgatcaggaa
gtgaaatcagtttctgaaggaaggtcattagaagatgcagagagcccgaatcatgctgag
gagtcagatgaagaagatagattgaattctgaagaaaaacttgctgaagatatggagact
gccccagaagaagaaacaaaaatcgatgaagacgaagaagtggatgaatcaggcaaaggc
acaagagaagaagctaatgaggacaaatcagacaccgaagagaataaagaagttggtgat
ggtgggactagtcctgcaaatttagagaaagatgatgctgctgaactatcggacgacgag
ccacttagcaagtggaagcggaaagttggaaaatcaggctcaaggggagcagcataa
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