Mangifera indica (mango): 123219061
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Entry
123219061 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123219061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123219061
03036 Chromosome and associated proteins [BR:
minc03036
]
123219061
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123219061
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123219061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
123219061
NCBI-ProteinID:
XP_044496712
LinkDB
All DBs
Position
6:complement(5223850..5230918)
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AA seq
1065 aa
AA seq
DB search
MASSSLLPVVGGFCELHSARINISSDNIHVMGSAAGTSSNVSQYNKRKILHNADLSSCEI
LREIRDVLPILQSSDYYMKPCLEDLIRSEVKDPGYSSRVPDFTVGRHGYGYVKFLGNTDV
RCLDLDQIVKFHRHELVVYEDEDSKPANGQGLNKAAEVTLMLQIRNLSSKDGHLNDVVKK
LKESTQRQGAQFISFDSMNGEWKFLVDHFSRFGLSEDEEEDIAMDDATPVQDSAEMNGEV
YDVDEETQMDSMGPELSHSLPAHLGLDPIKVKEMRMLMFQEEEIDDFNGMPLRQKPSLVK
EYIRSPLQYSSQKMSHRSSPPVARKPPLALLEYHPGSFDSASPGTILMTQQNKGLPVKKI
KSDGFKLDLRHETPVTGSHSHNIVDAGLFMSRSFRVGWGPNGILVHSGAPIGTNNSHGVL
SSVINVEKVAIDKVLRDENNKVRKELVEFSFDAPLNLHKELNHETKEVEVGSFKLKLQKV
VSNRLVLSEICRSYIDIIEAELDVPGISSSARLVLMHQVMVWELIKVLFSERENSGQSKP
VAADNEEDIMQDMKEGPPDVDTEALTLIRRAEFSYWLQESVCHRVQEEVSSLDESNYLKH
IFLLLTGRQLDSSVELAASRGDVRLACLLSQAGGSMVSRSDIARQLDLWRLNGMDFNFIE
KDRIRLYELLAGHIHGSLQDVKIDWKRFLGXLMWYQLPPDTSLPVVFQTYQHLLEDGKAP
PPVPIYVDEGPIDEPIHQGTKEHFDLSYYLMLLHASGESKFGFLKKMFSAFSSTHDPLDY
HMIWHQRAVLEAVGAFNSNDLQSLDMGLISQLLCQGQCHWAIYVVLHMPHHDDYPYLQAT
LIREILFQYCESWSSQESQRQFIEDLGVPTEWLHEAMAVYFSYYGDLSKALEHYLECANW
QKAHSIYVTSVAHKLFLSGNHSEVWRLVTSMENHKSEIENWDLGAGIYISFYLIRSSLQE
NDNPMSEMESLEGKNAACKDFLDRLNESLAVWDGRLPIEARVAYSKMAEEISNLLLSDIS
EGPTRDAQLSCFETVLSAPIPEDFRSNHLQDAVSLFSCYLSEIAS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcttctctgctcccggtcgtcgggggtttctgtgaacttcatagtgcaaga
ataaatatctcatcggataatattcatgtaatgggctctgctgctggaacttcctctaat
gtatctcaatacaacaaaaggaagatcttgcataacgctgatctttcatcatgtgagata
ttgagagagatcagagatgtcttacctattttgcagtcttctgattattacatgaaacct
tgcttggaggatttgattaggagtgaagtcaaagatccaggttattctagccgggttcct
gatttcacagttggacggcatggttatggatatgtaaagtttcttgggaacactgatgtt
agatgtctagatctagatcaaattgtaaagttccataggcatgagttagttgtgtatgaa
gatgaagattcaaagcctgcaaatggtcagggcctaaacaaagcagctgaagtgactttg
atgctacaaataagaaatttaagttcaaaagatgggcatttaaatgatgttgtgaagaaa
ttgaaggagagtacacagagacaaggcgctcagttcatttcgtttgactctatgaatggt
gaatggaaattcttggttgaccattttagcagatttgggttaagtgaagatgaggaagaa
gatattgctatggatgatgcaacccctgttcaagattcagcagagatgaatggtgaggta
tatgatgtcgatgaagaaacacaaatggattctatgggacctgagctttctcattctctt
cctgcacatcttgggcttgacccgataaaggtgaaagaaatgagaatgttgatgtttcaa
gaagaggagattgatgatttcaatgggatgcctttgcggcagaaaccatcccttgttaaa
gaatacataagatctcctctgcagtattcctcccagaaaatgagccacagatctagtcca
cctgttgcacgaaaacctccactagctttgctggagtaccaccctggtagttttgattct
gcttctcctggaacaattctgatgactcaacagaataagggcttgcctgtaaagaaaata
aaatcagatgggtttaagctggatctcaggcatgagacaccagtaactggaagccactct
cacaatattgttgatgcaggtttgtttatgagtagatcatttcgtgttggatggggccca
aatggcatccttgttcacagtggtgctccaattggtactaataactcacatggggtacta
tcttctgtgatcaatgtggagaaggttgcaattgacaaagtgttaagagatgagaataac
aaagtgagaaaggaacttgttgaattttcatttgatgctccattgaacctccacaaggag
ttgaatcatgaaacaaaagaagtagaggttggttccttcaagttgaagcttcaaaaggtt
gtgtcgaatcgtttggtgctttcagaaatttgtcggagctatatagacattatagaggca
gagctggatgtacctgggatatcttcttctgctcgtttggttttgatgcaccaagtaatg
gtctgggaattgataaaagttttattttcagaaagagaaaatagtgggcaatcaaagcct
gtggctgctgacaatgaggaagacattatgcaggatatgaaggaaggtcctccagatgta
gacacagaagcactcactcttattcgaagggcagagttcagttattggctgcaagagagt
gtttgccaccgggtacaagaggaagtaagctccttggatgaatcaaattatctaaagcac
atatttttactcctaacagggcgacagctagactcatctgtggaactggctgcttccaga
ggagacgtaagactggcttgtttgttaagtcaagctggtgggtccatggtgagccgttct
gatattgctcgtcagcttgatctttggcgactgaatgggatggacttcaatttcattgag
aaagatagaattaggctttatgagttgcttgctggccatattcatggctcattacaggat
gttaaaattgattggaagaggttcctaggtntattgatgtggtatcaactaccacctgac
acctcattgcctgttgtttttcaaacttatcagcaccttcttgaagatggaaaggctcca
cctcctgttccaatttatgttgatgaaggacccatagatgagcctattcaccagggtaca
aaggaacactttgacctctcatattatctgatgcttcttcatgccagtggtgagagtaaa
ttcggctttttgaagaaaatgtttagtgccttctcttcaacacatgatccactagactac
catatgatctggcatcaacgtgcagttttagaagcagttggtgccttcaattctaatgat
cttcaaagccttgacatgggacttatttctcagttgctgtgtcagggacagtgtcactgg
gccatctatgtggtccttcatatgcctcatcatgatgattatccatatctgcaggctacc
cttattcgagaaatcttgttccaatattgtgaatcctggagctcacaagaatcacaacgc
cagtttattgaggatttgggtgttccaacggagtggctgcatgaagctatggcagtttat
tttagttactacggtgatctctcaaaggccttagaacactatcttgaatgtgcaaattgg
caaaaagctcactctatatatgttacttcagtcgcccataaattatttttgtcaggcaac
cactcagaagtgtggaggcttgtgacatccatggagaaccacaagtcagagattgagaat
tgggacttgggagctggaatttacatttctttctatttaataagaagttcattgcaggaa
aatgacaatcctatgagtgaaatggaatcccttgagggcaaaaatgctgcttgcaaggac
ttccttgatcgtttgaatgagtctttggcagtttgggatggtagattacccatagaggca
agagttgcatattcgaagatggcagaggagatatccaatttgctgctatcagatatcagc
gagggtccaactcgagatgctcagctatcttgctttgaaaccgtcttgagtgctcccatt
ccagaagacttccgctctaatcatctgcaggatgcggtatcacttttttcatgttatctt
tcagagatcgcctcttag
DBGET
integrated database retrieval system
