Mangifera indica (mango): 123219214
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Entry
123219214 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123219214
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
123219214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
123219214
NCBI-ProteinID:
XP_044496957
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All DBs
Position
6:3165370..3168506
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AA seq
653 aa
AA seq
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MADLENLLLEAAGRTNTSGRNRHSHPPSRRRREGSYSGSDSRDDDSDDDRGYASRKPSGS
QVPLKKRLDPAERDEEQGSQEEGDFDDGGSGREGDSSNESDEDNHAQMTELEREMMIFER
DDKKVDKNLRDKFRSRREERSTRSRKETPPLPSSRGVRLSTRSADRAAAKDDALNELRAK
RMKQQDPEAHRRLRDESRGSSGNRGLSPVKRKTFTPASLSSSSQSESESRSHSEDEGSSG
DGGMADSDDDRGITGSGGPTFEDIKEITIRRSKLXKWFMEPFFEELIVGCFVRVGIGRSK
SGPIYRLCMVRNVDATEPDRLYKLENKTTYKYLNVTWGDERSAARWQMAMVSDSSPLEEE
FKQWVREVERSGGRMPSKQDVLEKKEAIQKTNTFVYSAATVKQMLQEKKSASSRPLNIAA
EKDRLRRELEVAQSRHDEIEVERIKKRLQQLEASRESKVKDAKAIRLAEMNRKNRVENFK
NASGLKPINTSLKAGEAGYDPFSRRWTRSRNYYVSKPDEGDTAAVTDGGSNDPSTAAVVT
GAGAGAGAATVMAEAGMAATAAALEAAAGAGKLVDTSAPVDQGTESNVLHDFELDISLNT
LKKFGGPQGALAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttagagaatttgcttttggaggcagctggaagaacaaatacttcaggaaga
aaccgtcattctcatcctccctctagaaggcggcgtgagggttcatattctggaagtgac
tctagggatgatgattcagatgatgatcgtgggtatgctagcagaaaaccctctggatcc
caagttcctttaaagaagaggctggaccctgctgaaagagatgaagagcagggtagccag
gaagaaggcgatttcgatgatggtggttcaggtcgtgaaggtgacagcagcaatgaatct
gatgaggacaaccatgcacagatgactgaactcgaaagagagatgatgatatttgaacga
gatgataagaaagttgataagaatctgagggacaagtttagatcaaggcgggaagagagg
tccacccgatcccgaaaagagactcctcctcttccatcatctcgaggtgtgcgcctttca
actagatctgctgatcgggcagctgcaaaagatgatgcgttgaatgagctgagagcaaaa
cgaatgaagcagcaggacccagaggctcaccgaaggttgagggatgaatctcgaggcagt
tcaggaaacaggggtttatcacctgtcaagcgaaaaacatttactcctgcgagtctgagt
agctccagccagagcgagagtgaaagtaggtctcacagtgaagatgaaggatcttcaggg
gatggtggaatggctgacagtgatgacgacaggggcattactgggtcagggggacctact
tttgaagacataaaggaaatcactatcaggaggtcaaaacttngcaagtggttcatggag
ccgttttttgaggagttgatagttggttgctttgttagggttggaattgggaggtcaaaa
agtgggcctatttatcggctctgcatggtcagaaatgttgatgctacagagcctgatcgg
ttgtacaaactagagaacaagacaacatacaagtatctgaatgtcacctggggtgatgag
aggtctgctgcccggtggcagatggctatggtttcagactcctctccacttgaggaggag
tttaagcagtgggttagagaggtggagcgaagtggtggccgaatgccaagcaaacaggat
gtgttggaaaaaaaggaggctatacaaaaaactaatacgtttgtgtattcagcagccact
gtaaagcagatgttgcaggagaaaaaatctgcctcatcacggccattaaacatcgctgct
gagaaggaccgacttaggagggagttggaagttgctcagagtaggcatgatgaaatagaa
gtggagaggatcaagaaaagattgcagcaactggaggcatcgcgggaatcaaaggtaaaa
gatgctaaagctattcggctcgcggagatgaataggaaaaacagagttgagaatttcaaa
aatgcatctggactgaagcccataaatacaagtttgaaagcaggggaggcagggtatgat
ccattttcaagaaggtggactaggtcaagaaattactatgtctctaagccagatgaagga
gacacggctgcagttacagatggtggcagtaatgatccatcaacagctgcagttgttact
ggggcaggggcaggagcaggagctgcaactgtgatggcagaggctggcatggcagctaca
gcagcagccttggaagctgcagctggtgctgggaaattggttgatactagtgctcctgtt
gatcaaggaacggaatcaaatgtgctgcatgattttgagcttgatatatctttgaataca
cttaaaaagtttggtgggcctcagggagctcttgctggattcatggcaaggaagcaaagg
atagaagcaacagttggatgccgagttccagaaaatgatggaaggagacatgctttgaca
ttgacagtcagtgattacaagagaagaagaggacttctctaa
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