Mangifera indica (mango): 123219433
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Entry
123219433 CDS
T07684
Name
(RefSeq) exosome complex exonuclease RRP46 homolog isoform X1
KO
K12590
exosome complex component RRP46
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123219433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123219433
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123219433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
123219433
NCBI-ProteinID:
XP_044497340
LinkDB
All DBs
Position
6:complement(17900309..17903650)
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AA seq
174 aa
AA seq
DB search
MEIDRAVGHTPNRLRLFSYSRNTLHRAYGSASWSQGDTKVLAAVYGPKAGTKKNENPEKP
CFEVIWKPKTGQIGKLEKDYEVILKRTVQSRCILTVNQNTTTSIIIQVVHDDGALLPCAI
NAACAALVDAGIPMKHLPVAICCCLAESRYVILDHTKLEEEVTLVSLFKFTISL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggagattgatagagctgttggtcatacaccaaatcgattgagactgttctcttactct
cgcaacaccctccaccgtgcctatggctctgccagttggtctcaaggagacacaaaagtt
cttgctgctgtttatggaccaaaagctggaacaaaaaagaatgaaaatcctgagaagccc
tgctttgaagttatttggaagcctaaaactggacaaattgggaaactggagaaagattac
gaggtgatactcaagcggactgtacaaagcagatgcattttgactgttaatcaaaatact
acaacctcaattataattcaggttgtccacgatgatggtgctcttctaccttgtgccata
aatgcagcatgtgctgctcttgtagatgctggaattcctatgaagcatcttcctgttgcc
atatgttgctgcttggcagagagtaggtatgtgattctggaccacacgaaattagaagag
gaggttactttagtttccttgtttaaattcacaatatctctttga
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