Mangifera indica (mango): 123219671
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Entry
123219671 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: U3 snoRNP-associated protein-like YAO
KO
K14793
ribosomal RNA-processing protein 9
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123219671
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
90S particles
Other 90S particles
123219671
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
123219671
NCBI-ProteinID:
XP_044497602
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All DBs
Position
6:complement(12257076..12265815)
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AA seq
342 aa
AA seq
DB search
MVRLRIHSTLLKEIYVAQLTNEWLRSILLTETYSSLYVAHPGSVKMYKDSGKVIWVVWYE
KEYGRFVAKCLVFAGHRSPVSCFTFRQGTSELFSGSFDGTVKIWNAEDRAYMNTLFGHQS
EVLTIDCLRRERVLTVGRHRTMQLWKVPEESRLVFRSPASSLECCCFISNDEFLSGSDDG
SVELWSLLPKKPAYIVKNVHPLLAGHKKDEQNENGKPSNGLMENGDHNPGIYHSLSAYSW
VISISICRGSDLAASGDGNGFVHVWAIKSETKDIQPLYDLPLLGLVNSLAFAKSGCFLVA
AVGQVTYLMALKYLLXXEPRLGRWGNLPAARNSVSVHPLTLS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggttagattaaggattcattcaaccttgttaaaagagatctatgtagctcaattgact
aatgagtggttgaggagtatactcctcacagagacttatagttccctttatgttgcccac
cctgggagtgtaaagatgtataaagactcgggaaaagtcatatgggtggtttggtatgaa
aaagaatatggtcgatttgttgccaagtgtttagtctttgcaggtcacagaagccctgta
tcttgttttactttcaggcaaggaacttctgaacttttttctggttcatttgatggaacg
gtgaagatatggaatgcagaagacagagcttatatgaacactctatttggtcaccaaagt
gaagtattgaccattgactgcctacgaagagaacgggtattaactgttggacgtcatcgg
acaatgcaattgtggaaggtccctgaggaatcacgcttagtatttcgttctcctgcttca
tctttggaatgttgttgctttatcagtaatgatgaattcttgtctggttcggatgacgga
agtgttgagctttggagtcttctgccgaagaaacctgcttacattgtgaagaatgttcat
cctttgttggctggccacaagaaagatgaacagaatgagaatggcaaaccctccaatggt
cttatggagaatggtgatcataatcctggaatctatcattcattatcagcgtattcctgg
gtcatttcaatcagtatatgcagagggagtgatcttgctgcatcaggtgatggtaatggt
tttgtccatgtatgggctattaaaagtgaaactaaggacattcaaccattgtacgacctt
ccattgttgggtcttgtgaattcccttgcttttgcaaaatctggatgcttccttgttgct
gcagtagggcaggtgacatatctgatggcattgaaataccttctgtaataggaacctcgt
ctcggaagatgggggaaccttccagcagctcgaaatagtgtttctgttcatccccttaca
ctctcataa
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integrated database retrieval system
