Mangifera indica (mango): 123219943
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Entry
123219943 CDS
T07684
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
minc
Mangifera indica (mango)
Pathway
minc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123219943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123219943
03036 Chromosome and associated proteins [BR:
minc03036
]
123219943
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
123219943
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
123219943
RSF complex
123219943
WICH complex
123219943
B-WICH complex
123219943
NORC complex
123219943
BRF complex
123219943
NuRF complex (fruit fly)
123219943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
123219943
NCBI-ProteinID:
XP_044497849
LinkDB
All DBs
Position
7:18985061..18992755
Genome browser
AA seq
1065 aa
AA seq
DB search
MARPRESSDEAMSNGSSSSEDEQITDQINEDDEEELEAVARSAGSDEDNSPVSDDEAVAE
AEDGEEQDENGGTGAEVSKRERARLKEMQNLKKQKIQEILDAQNAAIDADMNNRGKGILK
YLLQQTELFAHFAKGSQSASQKKVKGRGRHASKMTEEEEDEEYLKEEEDGLSGTTRLVTQ
PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPH
LVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPDERRHIREELLVAGKFDVCVTSFEMAIK
EKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLN
FLLPEIFSSAETFDEWFQISGDNDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETIL
KVGMSQMQKHYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTT
GEHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFCGYLYCRIDGNTG
GEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH
RIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRF
GAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDDE
KDENKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGGPAKPKEPRIPRMPQLHDF
QFFNTQRLSDLYEKEVRYLMQTHQKNQLKDTIDVDEPEEGGDPLTAEELEEKERLLEEGF
SSWSRRDFNTFIRACEKYGRNDIKSIALEMEGKTEEEVERYAKVFKERYKELNDYDRIIK
NIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKL
GYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKE
KKLAKNMTPSKRAVGRQQPNESPSSLKKRKQLSTDDYLSSGKRRK
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggccacgagaatcgtccgatgaagccatgtcgaacggctctagttcgtcggag
gacgagcaaatcactgatcagatcaacgaagacgatgaggaggagctcgaagccgtggca
cgctctgctggctccgacgaagacaactccccggtgtccgatgacgaagctgttgctgag
gctgaagacggtgaagagcaagatgaaaatggtgggactggtgcagaagtcagcaagcga
gagagggcaagactaaaagaaatgcagaacttaaagaaacaaaagattcaggaaatattg
gatgcacaaaatgctgctatagatgctgatatgaacaatagagggaagggcatattgaag
tatcttttacagcaaacggagttgtttgcccattttgccaaaggttcccaatctgcatct
caaaagaaagtgaaaggaaggggtcgccatgcatctaaaatgactgaagaggaagaagat
gaagaatacttgaaggaagaagaagatggtttatcaggaaccacacgactggtaacgcaa
ccttcttgtattcaagggaagatgagggattaccaacttgctgggttaaactggctcatt
aggttgtatgagaatggtataaatgggatccttgcagatgaaatgggtctgggcaaaact
ttgcaaaccatatctttgttgggctaccttcatgagtttagaggaattactggtcctcat
ttggtagttgctccaaaatctacccttggtaactggatgaatgaaattcgtcgtttctgc
ccagttttacgtgctgttaagtttcttggaaatccagatgaaaggagacatatacgtgag
gagttacttgttgctgggaagtttgatgtgtgtgtcacgagttttgaaatggccatcaaa
gaaaagtctgccttacgtcgcttcagctggcgctatataatcattgatgaagcccatcga
atcaagaatgaaaattctctcctttcaaagacaatgagactatataataccaattaccgt
cttcttatcacgggtactccgcttcagaacaatcttcatgaactatggtcccttcttaat
ttcttgcttcctgagatctttagttcggctgaaacttttgatgagtggttccaaatttct
ggtgacaatgaccagcaggaagttgtccaacaacttcacaaggtgctacggccatttctt
ttgcgaagattgaagtcagatgttgagaaaggtctgcctccaaaaaaggaaacaatactg
aaagtgggcatgtcccagatgcaaaaacattactacagagcattgctacagaaagatctt
gaagttgtgaatgcaggtggagaacgtaaacgtcttctgaacatagcaatgcagctgcgt
aaatgctgtaatcatccatatctgttccaaggggctgaacctggccctccttatactaca
ggggagcatcttataacaaatgctggtaaaatggttcttttggacaagttgcttccaaag
ctaaaagagcgtgattctagggtcttaatattttctcagatgacaaggctgctggacatt
cttgaagactatttaatgttttgtgggtacctttattgtcggattgatggcaatactggt
ggagaagatcgagatgcttctattgaggcgttcaataagccaggaagtgagaaatttgtt
ttcttgttgtcaactagagctggaggccttggtattaatcttgccactgccgatgttgtc
atcctttatgatagtgactggaaccctcaagtggatctgcaagcacaggatcgtgcccat
aggattggccagaagaaagaagttcaagtgttccgattttgcacagagtataccatcgag
gaaaaagtgattgagagagcatataagaagcttgcacttgatgctctggtgattcaacaa
ggaagattagctgagcagaaaactgtcaataaagatgagctgcttcagatggtgagattt
ggtgctgaaatggtcttcagctctaaggatagcacaattacagatgaggatattgacaga
attattgctaagggagaagaggcgacagctgaattggatgcaaagatgaaaaaatttaca
gaagatgcaatcaaatttaaaatggatgacactgctgaattgtatgattttgatgatgag
aaggatgagaacaagtttgatttcaagaaaattgttagtgaaaactggattgaacctcca
aaaagagagcggaagcgcaattactctgaatctgagtactttaaacaaacaatgcgccaa
ggtggacctgcaaaaccaaaagagccacgaattcctcggatgccccaattgcatgatttt
caatttttcaacactcagaggttgagtgacttgtatgaaaaagaagtacgctacctcatg
caaacacatcagaagaatcagttgaaagacacaattgatgtagatgagcctgaggaaggg
ggagatccactgactgcagaagaattggaagaaaaggaacgattattagaagaaggattt
tcttcctggagtagaagagatttcaatactttcattagggcatgtgagaagtatggacga
aatgacataaaaagtatagcattagaaatggaaggcaaaactgaggaagaagttgaaaga
tatgctaaagtctttaaagaacgatacaaggagctaaatgattatgataggatcataaag
aacattgaaaggggagaggctagaatttctcggaaagatgagatcatgaaagccattggg
aagaaattagatcgctataaaaatccatggctagaattaaagattcaatatggtcagaac
aaaggaaagttatacaatgaagaatgtgaccgtttcatgatatgcatggttcacaagctt
ggatatggaaactgggatgagctcaaggcggcatttcggacatcaccattgtttcgattt
gactggtttgtgaaatctcgtaccactcaagaacttgccaggagatgtgataccctcatt
cggttggtggagaaggaaaaccaagaatatgatgagagggagagacaggcccggaaagag
aagaaacttgccaagaacatgaccccatcaaagcgagctgtgggaaggcagcagccaaat
gagagcccaagttccctaaagaagcggaagcagttatcaacggatgactacctgagctcg
gggaagaggaggaagtga
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integrated database retrieval system
