Mangifera indica (mango): 123220080
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Entry
123220080 CDS
T07684
Name
(RefSeq) syntaxin-43-like isoform X1
KO
K08489
syntaxin 16
Organism
minc
Mangifera indica (mango)
Pathway
minc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
123220080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123220080
Membrane trafficking [BR:
minc04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
123220080
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
EF-G-binding_N
FlxA
Prominin
ZSWIM1-3_C
DGKD_4H
MCPsignal
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
123220080
NCBI-ProteinID:
XP_044498021
LinkDB
All DBs
Position
7:13423316..13426979
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AA seq
323 aa
AA seq
DB search
MATRNRTLIFKRYRDALKTVRVPTSLSAQNLSKGPVIEMVSSSLLNSSRKYAPLSTDDPG
NSSKGAVTVTVGLPPSWVDVSEEIAANVQRARTKMAELARAHAKALMPSFGDGKEDQRLI
ETLTQEITNLLRRSEKRLQLLSASGTSEDSNVRKNVQRSLATDLQNLSMELRKKQSAYLK
RLRQQKEGQDGVDLEMNLHGSRSRTEDDDLDDMAFNENQIAKLKKSEAFTAEREREIQQV
VESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEEGLKQLQKAERTQKQGGMVM
CATVLVIMCFVMLVLLILKEIFF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggctacgagaaatcggaccttgatattcaagagatacagagatgcgttgaagaccgtg
agggttccgacgagtctttcggcgcaaaatttatccaaaggaccggtgatcgagatggtc
agctcgtcgctgttgaattcgagtcggaaatacgctcctcttagtacggacgatcctggc
aattcaagtaagggtgcagttacagttacagttggtttaccaccatcttgggtggatgta
tcagaggaaatagcagctaacgtgcaacgcgcacgaacaaaaatggctgagctagccaga
gctcatgccaaggctttaatgccttcatttggagatggtaaagaagatcagcgcctgatt
gagactcttactcaagaaataacaaaccttttgaggagatcagagaagagattacagcta
ctttcagcttctgggacttctgaagattcaaatgttagaaaaaatgtgcagcgatctctt
gccacagaccttcagaacctctccatggagctccgtaagaaacagtcagcttatttgaag
cgcctcaggcaacaaaaagagggtcaagatggagttgatttggagatgaatctacatgga
agtagatctagaacagaagacgatgatttggatgacatggcatttaatgagaatcagata
gcaaaactgaaaaaaagtgaggcattcacggcagaaagagaaagagagatccaacaggtt
gtggaatcagtaaatgagcttgctcaaataatgaaggatctttcagtacttgtaatagac
cagggcactattgtagatcggatagactacaatattcagaatgttgcaactactgttgaa
gagggccttaaacaacttcagaaggcagagagaacacagaaacaaggggggatggtaatg
tgtgccaccgttctagttatcatgtgctttgtcatgctggtcctcctaatcctcaaggaa
atatttttctga
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