Mangifera indica (mango): 123220094
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Entry
123220094 CDS
T07684
Name
(RefSeq) SAC3 family protein B isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123220094
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
123220094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
INT10
Motif
Other DBs
NCBI-GeneID:
123220094
NCBI-ProteinID:
XP_044498041
LinkDB
All DBs
Position
7:17438557..17450061
Genome browser
AA seq
1602 aa
AA seq
DB search
MADHNAGFGRQSGPSVPTKPLPTFGNFTPPASSSSPFANTTPSPRQHDVVERTSPPPVSF
GSSAPTAGLNQTSRVRRPEAPQKVLSPPSAFENPHSLAGPSYSSAGVLRSIVPPHRLDDG
QRSFFKDYDAPSHARPSAVTSVVASPNSGTSAMAKIARFQELKRTRSPPLLSGDEEFSRK
SIQPMHPRPILSSPMGGNHATLLGNYPNLPAHQGPFRASPNVGSYDSERSYMEQVPNVQG
PKRTKFPHVPSENRLSWENPRFNVFHSSSDSQFPQRSVPSANSTGVAATRFTSSPISERT
RSPPHSFDEGLHRNLSSTQYDTEREMQAKAKRLARFKVELSEDVQISPDFADQRVSTDRQ
EQSAVERQKIVGAPSLESSKDYLNENSLSDYEGLETSSIIIGLCPDMCPESERAERERKG
DLDRYERLDGDRNQTSKYLAVKKYNRTAEREANLIRPMPILQKTVGHLLDLLDKPYDERF
LGLYNFLWDRMRAIRMDLRMQHIFNREAITMLEQMIRLHIMAMHELCEYTKGEGFSEGFD
AHLNIEQMNKTSVELFQMYDDHRKKGINVPTEKEFRGYYALLKLDKHPGYKVEPAELSLD
LAKMTPEIRQTPEVLFARDVARACRMGNFISFFRLARKASYLQACLMHAHFAKLRTQALA
SLHSGLLNNQGLPVAHVGRWLGMEEEDIENLLEYHGFLIKEFEEHYMVKEGQFLNSDSDY
PTKCSKLVHMKRSKTMVEDILASTQAIFLPTEAKKEIQLDKIYKHDKAAIPYIGRKISVC
AVNEEMPDSAAISPPKHSRSVPPLIEASMVDQQSQDDHKVTMASTSPWSFLVPHTSPKHQ
PARVVSEEKQDDDPLFRMSPENKSAFGMEVFPLQIVPRTSQQDRSPSFRRYDYSVDNALP
QVVAINNLEDEEPSVTYQEKENDEVMIGENDEAMENEKDEVRASYIEEEVALAKLKLILR
LWRRHSSKLKELREQRKLAANAALNSLSLGPRIQRNKDHSFTRGKFDIDHVMIERYEKQE
RSWSKLNVSDVVAGILRRRNRDAKFLCWKIILCSQDSQEGDEHMQRGQVSHFAAESWLFS
KLMPPRKDYDDDLLVSFPGLSIWKKWLPSQSGSDLTCCFSIVKSTKVDPPNNTVSGVSAV
LFLVSENIPWKLQKIQLHNLLMSIPSGSCLPLLILSSSCNEEVLDPSAVIVDGLGLRDID
KSRVKSFVVKFLVGNQQLGYSDGFFSDEQLREGLDWLANESPVQPVVHCVKTRELILSHL
GSALEVLKKLSDHEVSPNHCISAFNKALDLSRDEIVAAAKANPASWPCPEIAIVENSGDF
IENCCVPSIGWSSTERTESFECSLNNLKLPAFPDDISWLSRGSNMGKEIEIQRSQLENCL
IRYLTQSCMMGASLAIKEASIMLQRSTRLELQNLSYYMVPNWVVIFRRIFNWRLMSLANG
ALSSAYVLEEHLSALALDNLDKSGLVGMPYSVNHLSLDEVLEGGFGSHLTQWTHCRPLGN
KEIDRHHINPEVQWHLPGLVLNGEVQEPANIINLEDDERNSPQKDKLVTTDDVSQTTSKL
NNTATEIMLSENVERETENLSDLFERCFMVQNTNYKRLSVFF
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcataatgcagggtttggaaggcagtcaggcccctctgttcccacaaagccc
cttcccacttttggaaatttcactcctcccgcctcttcttcttctccttttgccaatact
actccatctcccaggcaacatgatgttgtagagaggacaagcccacctcctgtgtctttt
gggagctccgctccaactgccggactaaaccaaacttccagagtaagaagacccgaggct
ccacagaaagtgctgtcacctccttcagcatttgaaaaccctcattctcttgctggtcct
tcttactcatctgcaggggtccttagatccattgtgcctcctcatagattggatgatggg
caaagatctttcttcaaagattatgatgccccatctcatgccaggccttctgcagtgaca
tcagttgttgcttcacctaattctggaactagtgccatggctaagattgcccgattccaa
gaactgaaaaggactaggtcacctcctttactctctggagatgaagaattttcaagaaaa
tctattcaacctatgcatccaagaccaattttatcttctcctatggggggtaatcatgcc
acattgcttggcaattatcccaacttacctgctcatcaaggtccgttcagagcctcgcct
aatgttggttcttatgattctgaaagaagttatatggagcaagttcctaatgtgcaaggc
ccaaaacgaaccaagttcccacatgtgccatcggaaaatagactttcttgggaaaacccg
cggttcaatgtttttcacagttcctctgattctcaatttcctcagaggtctgtgccatct
gcaaacagtactggtgttgctgctaccaggttcaccagctcaccaatttcagaaagaact
aggtctcctccacattcttttgatgaaggtctacacagaaacttgagttccactcaatat
gatactgaacgagaaatgcaagccaaggcaaagcgactggctcgtttcaaggtggaactg
agtgaagatgtgcaaatcagtcctgattttgctgatcaaagagtttctactgatagacaa
gaacagtctgctgtggagaggcaaaaaattgttggggcaccttctttagaatcatcaaag
gattatctgaatgaaaattctttatctgattacgaaggcttggaaacatccagtataatt
attgggttgtgtccagatatgtgtcctgagtcagaaagggcagagcgagaaagaaaaggg
gatcttgatcggtatgaacgcttggatggggatagaaatcaaactagcaaataccttgct
gttaaaaagtataataggacagcagagagggaagccaatttaatacgacctatgccaatc
ctgcagaagacagttggtcatcttctcgatttgctagataagccctatgatgaaaggttt
cttggcttatacaatttcctatgggataggatgcgagctatccgaatggacctgaggatg
cagcatatttttaaccgagaagctattactatgctggaacaaatgataaggcttcacatt
atggccatgcatgagctatgtgaatacacaaagggagagggcttttctgagggatttgat
gcacacctcaatattgagcagatgaataaaacatcagttgagttgttccagatgtatgat
gatcacaggaaaaaggggataaatgtaccaacagaaaaagaatttcgaggttattatgca
cttctcaaattggacaaacatcctgggtacaaagttgaaccagcagagctatcgttagat
ctagcaaagatgactccggagataagacaaacaccagaagtattatttgcccgtgatgtt
gcaagagcttgtagaatgggaaattttatctccttctttcgacttgcaaggaaagcgagt
tatcttcaagcatgcctaatgcatgctcattttgctaagttacgaacccaggcacttgct
tccctacattctggtctactgaataatcaaggtctccctgttgcccatgttgggaggtgg
cttggtatggaggaagaggacatagaaaaccttttagaatatcatggttttttgataaag
gaatttgaggagcattatatggtaaaggaaggccaatttctcaatagtgacagtgactat
cccaccaagtgttcaaaacttgtccacatgaaacgatcgaaaacgatggttgaggatatt
ttggcttctactcaagccatattcttgcctactgaagcgaaaaaagaaattcagcttgat
aagatctataagcatgacaaagcagccattccttatattggaaggaaaatctcagtctgt
gcagttaatgaagaaatgcctgattctgcagccatttcacccccaaaacatagcagatca
gtgccacccttaattgaggcatcgatggttgatcagcaaagtcaagatgaccacaaggtg
actatggctagtacttctccctggagtttcttagtacctcatacttcccctaaacaccag
ccagctagagttgtatctgaggagaaacaagatgatgatcctcttttcagaatgtctcca
gagaataagtctgcttttggcatggaagtttttcctcttcaaattgtgccaagaacatct
cagcaagatagatcccccagttttagaagatatgattattctgtagataatgcattgcct
caagttgtagctattaataacttagaagatgaagaaccttccgttacttatcaagagaaa
gaaaatgatgaagttatgataggtgaaaatgatgaagctatggaaaatgaaaaagatgaa
gttagggcaagttatatagaggaagaagttgctctggcaaaactcaagttaatcttaagg
ttatggaggcgccattcgtcaaagctaaaggagttgcgtgagcaaaggaaactagctgca
aatgcagccctaaattcgttgtcactgggaccacgaattcaaaggaacaaagatcattcc
ttcacacgtggcaagtttgatattgatcatgtcatgatagagagatatgagaaacaggaa
cggtcatggtcaaagctgaatgtttcagatgtggtagcaggtatactcagaagaagaaac
cgagatgctaagtttctgtgctggaaaattattctatgttctcaggacagtcaagaaggg
gatgagcacatgcagagggggcaggtttcacattttgcagcagaatcgtggttgttttca
aagctaatgcctcctaggaaagattatgatgatgatctgctagtttcatttcctggcctt
tcaatatggaagaagtggcttcctagccaatctggctctgatttgacttgctgcttctca
attgttaagtcaacaaaagttgaccctccaaataatactgtatctggtgtaagtgcagtt
ctgtttcttgtatctgaaaacatcccatggaagctccaaaaaattcaactccataatctt
ctgatgtcaataccttctggttcctgccttcctcttctgatccttagtagttcatgtaat
gaagaggttttagatccttctgctgttatagtcgatggattaggcctccgtgacattgac
aagtcaagggtgaagagttttgttgttaaattccttgttgggaaccaacaattgggttac
tcagatggatttttcagtgacgagcaactaagggaagggttggattggctggcaaatgag
tcacctgtacaacctgttgttcattgtgtcaagacacgtgaactcatcctgagtcacctg
ggctctgcactggaggtgcttaaaaagttgagtgatcatgaagtgagtccaaatcactgt
atatcagccttcaacaaagccttggatctgtcacgggacgaaattgtggctgctgccaaa
gcaaatcctgccagttggccctgtcctgagattgcaatagtggagaattctggtgatttc
atcgagaattgttgtgtgccaagcataggatggagctctacagagagaacagaatcattc
gagtgttcattaaataacttaaaacttccagcttttcctgatgatatatcctggttgagt
agaggctctaacatgggcaaggagattgagattcagagatcacaacttgaaaattgcttg
attagatatttgacacaatcatgcatgatgggagcttcactagctataaaagaggcatcc
ataatgctacaaagaagcacaaggcttgagcttcaaaacttgagctactacatggttcca
aactgggttgtgattttccgtcggattttcaattggcgactaatgagtctagccaatggg
gccttatcttcggcatatgttttggaggagcatctttctgctttggctttagataatctg
gataagtcaggacttgtaggtatgccttacagcgtaaaccatctgtctttagatgaagta
ctggaaggtggcttcggctctcatttgactcagtggactcactgtcggccccttggaaat
aaagagattgacaggcaccatatcaatccggaagttcagtggcatctaccagggctagtc
ttaaatggtgaagttcaagaacctgctaacataattaacttagaagacgatgaaagaaat
tccccacagaaagataaattggtcacgacagatgatgtttcacagactaccagtaaatta
aacaacacagccactgaaataatgttgtccgaaaatgtagagagagagactgaaaattta
agtgatttgtttgagcgatgcttcatggtgcagaacacaaattacaaaaggctgtcggtg
tttttctga
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