Mangifera indica (mango): 123220147
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Entry
123220147 CDS
T07684
Name
(RefSeq) RNA polymerase II-associated protein 3-like isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123220147
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123220147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_12
TPR_BSK1_C
TPR_11
TPR_16
TPR_9
TPR_CcmH_CycH
TPR_10
Coatomer_E
ARM_TT21_C
ANAPC3
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
123220147
NCBI-ProteinID:
XP_044498111
LinkDB
All DBs
Position
7:complement(13267813..13273176)
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AA seq
459 aa
AA seq
DB search
MSKHTRDQALDFQGFLNDLQDWEFSLKDKDKRMKPQASQKDNLKVGEKLRPCGNDSTVNS
YFKNYDAFSRISSSLMTEESLPDATSEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAY
ANRAMAFLKIKRFQEAEDDCTEALNLDDHYIKAYSRRATARKELGKLKESIEDSELALRL
EPQNQEVKKQYAEVKSLYEKEILQKASGKIKSSVQGMQKVGNPGIKVNRDEVCAVPNTTQ
KTGVVAVKENHAKQVSNGENTVRTLSVEEIGDRRIGAKSRAKGQQDGSQADGIQRFGLEK
RNHGTRKQDLNLSVHELASRAASRAIAEAAKNIKPPKSAYEFEVSWRGFSGDCTLQACLL
KATSPAALPQIFKNALSAPILMGIINTVATFFNEEIDLAVKYLENLTKVPRFDMLIMCLS
SKDKADLQRIWDETFCNEATPIEHAEILDNLRSKYCLNR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcacactcgcgatcaagcgctggatttccagggttttttgaatgacttgcag
gactgggaattttcactcaaagacaaagacaaaagaatgaagcctcaagcttctcaaaaa
gataatttgaaagttggtgaaaagcttagaccatgcggaaatgattctacggtgaattct
tattttaagaactatgatgcatttagtcgcatatcaagtagtttaatgactgaagagagt
ctaccagatgctacttcagagaaggaactgggtaatgagtatttcaagcagaagaagttt
aaagaagctattgactgttattcaaggagcattgctctgtcacccaccgctgtagcctat
gcaaatagggctatggcctttcttaaaatcaagagatttcaggaagctgaggatgactgt
acggaggccttaaacctggatgatcactacataaaagcttactcacgtcgagctacagct
agaaaagaacttgggaagcttaaagagtccatagaggattcagagttagccttaaggttg
gagcctcaaaaccaagaagtcaaaaaacaatatgctgaggtcaaatctctgtatgagaaa
gagattcttcagaaggcatctggaaaaattaaaagctctgtacaagggatgcagaaagtt
ggaaatcctggaattaaagtgaacagagatgaggtctgcgctgttccaaataccactcag
aagactggagtggtagcagttaaagaaaatcatgctaagcaggtaagtaatggagagaat
actgtaagaactctttccgtggaagaaattggagaccggaggattggagctaaaagcaga
gctaaaggtcaacaagatggttctcaagcagatggtatacaacgtttcggtttggagaag
aggaatcatggaaccagaaaacaagacttgaacctatctgtgcatgaacttgcttctcgt
gcagcatctcgagccattgctgaagctgcaaaaaacatcaaacctccaaaatcagcttat
gaatttgaggtttcttggcgaggcttctctggtgattgcaccttacaggcatgtctgttg
aaggccacttctccagctgcgctgccacagatatttaaaaatgccttgtctgctccaata
ctaatgggcatcattaacacagttgccaccttttttaatgaagaaatagatttggcggtc
aaatatctcgaaaatttaaccaaggtccctagatttgacatgctcatcatgtgcctttca
tcaaaagataaagctgatctccagagaatatgggatgaaacattttgcaatgaagctact
ccaattgagcatgctgagattcttgataatttgcgttcaaagtactgtctcaatcggtaa
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