Mangifera indica (mango): 123220156
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Entry
123220156 CDS
T07684
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123220156
Transcription machinery [BR:
minc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
123220156
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
HTH_36
HTH_9
Motif
Other DBs
NCBI-GeneID:
123220156
NCBI-ProteinID:
XP_044498119
LinkDB
All DBs
Position
7:9364452..9369525
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AA seq
507 aa
AA seq
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MMTTAAVIGLSTGKRLLSSSFYYSDLTEKFSQINDHGSPYYQVIPTKNVVAAKKSSNYSP
TYPSSKQHSQSTKALKEHLDTNFASTTEPWRQRSDDLEEENPDFDYSVEALLLLQKSMLE
KQWNLSFERTVLNDSSSKKTHKKIPVTCSGISARQRRMNLKKVLNQSKSMIQQNGPNLQR
SVISPELLQTRLKGYVKGVLSEELLTHAEVVRLSKKIKAGLSLDEHKLRLKERLGFEPSD
EQLAASLSISRTDLQSTLIECSLAREKLVMSNVRLVMSIAQRYDNMGADMSDLVQGGLIG
LLRGIEKFDSSKGFKISTYVYWWIRQGIHRALVENSRTLRLPNHLHERLGLIRNAKVRLE
EKGVTPSIDRIAQYLNMSQKKVRNATEAISKVFSLDRDAFPSLNGLPGETYHSYIADNRV
ENNPWHGVDGLMLKHEVNRLITETLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERV
RQVGLVALEKLKHAARKKNMEALLLKH
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccacggctgctgttattggacttagtactggaaagagactattgagctcctcc
ttttattattctgatctaacagaaaaattttctcaaatcaatgatcatggatcaccatat
tatcaagttattccaacaaaaaatgtggttgccgccaaaaagtcgtccaattatagtcca
acttatccatcttccaagcaacattctcagtccactaaggctcttaaagaacatttggat
actaattttgcttctactacggagccatggcgtcagaggtctgatgatttagaagaggaa
aacccagactttgactattcagtggaggcacttctgctgctgcaaaagtctatgcttgaa
aaacaatggaatctttcttttgagaggacagtattaaatgactcatcaagtaaaaagact
cacaagaagatacctgtcacgtgttctggaatatcggctaggcaaagaagaatgaatttg
aagaaggttttgaaccaaagtaagtcaatgattcagcaaaatggccccaatctgcagagg
tctgtgattagtccagagttgcttcagactcgtttaaaaggctatgtaaagggtgtgttg
agtgaggagctgctcacccatgcagaagttgtgcgtctatcaaagaaaatcaaagctggc
ctttccttagacgagcacaaattgagactgaaggagaggttgggatttgagccctcagat
gaacaacttgcagcttccttgagcatatctcgcactgacttacagtcaacattgattgag
tgttcattggcaagagagaagctggtgatgagcaatgttcgtttggtcatgtctatagct
caacgatatgataacatgggtgctgacatgtcagaccttgtgcagggtgggttgattgga
ttattacgtgggattgagaaatttgactcttcaaagggtttcaaaatatcaacttatgtg
tattggtggatacgccagggtattcatagggcattagttgagaattccagaaccttaaga
ttgcctaatcatctgcacgaaaggttaggtttaatccggaatgcaaaggttagactggaa
gagaaaggagtaacaccatcaattgatagaattgcacaatacctaaacatgtcgcaaaag
aaagtgagaaatgccactgaggcaatcagtaaggttttctcacttgacagggatgctttt
ccctcgttaaatggccttcctggtgaaacctatcatagttacattgcagataatcgtgtg
gagaacaatccatggcatggagtggatgggttgatgctcaagcatgaagtaaacagactc
attacagagacacttggagaacgtgaaagagaaatcatacgtctttactacggtcttgat
aaggaatgccttacatgggaggatataagtaaacgaataggtttgtcaagagaaagagtt
aggcaagttggacttgtggcgctagagaaactaaaacatgcagcgagaaagaaaaacatg
gaggccctgctgttgaaacattag
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