Mangifera indica (mango): 123220164
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Entry
123220164 CDS
T07684
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123220164
04121 Ubiquitin system [BR:
minc04121
]
123220164
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
90S particles
Other 90S particles
123220164
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123220164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Sof1
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
VID27
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
123220164
NCBI-ProteinID:
XP_044498132
LinkDB
All DBs
Position
7:16611106..16616078
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSIDEFTRERSQDLQRVYHNYDPTLRPQEKAVEYVRALNAAKLEKIFARPFIG
AMDGHRDGVSCMAKNPNYLKGLFSGSMDGDIRLWDIANRKTVCQYPGHQGAVRGLTVSTD
GRILVSCGTDSTVRLWSVPVATLTESDDSSDNSAEPLAVYVWKNAFWAVDHQWDGDLFAT
SGAQVDIWNHNRSQPVNSFQWGTETVISVRFNPGEPNVLATTASDRSIMLYDLRMSSPAR
KMIMRTKCNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKYVHMGHESAVMDIDYSPT
GREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK
AKASEQLGVLHPRERRKHEYHEAIKNRYKHLPEIKRIVRHRHLPKPIYKAAALRRTMIEA
ERRKAERRKAHSAPGSIINEPLRKKRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtaatttcacgttccattgatgaattcactcgggaacgaagccaagat
ctccagagggtctatcataattacgaccccactcttcgacctcaagagaaggcagtggag
tatgtcagagctcttaatgcagccaaattggagaagatttttgcacggccgtttattgga
gcaatggatggtcatagagatggagtatcgtgcatggccaagaaccccaactatttgaaa
ggattgttttctggctctatggatggagatattcgtctttgggatatagctaacagaaaa
acagtttgtcagtatcctggtcatcaaggtgctgtacgtggtttgacagtgtcaacagat
ggccgaattttagtatcatgcggaaccgactccactgtcaggctctggagtgttcctgtt
gctactcttacagagtcagatgattcatctgataattcagcggagcctctggccgtttat
gtttggaagaatgcattctgggctgttgatcaccagtgggatggagatctctttgccaca
tctggcgctcaagttgacatatggaatcacaataggtctcagccagtcaacagctttcag
tggggaacagaaacagttatatctgttaggtttaatcctggagaaccaaatgttttagca
acaacagctagtgatcgcagcataatgttatatgatttgcgcatgtcttcgccggcaagg
aaaatgatcatgaggacaaaatgcaattcaatctcttggaatcccatggagccgatgaac
ttcacagctgcaaatgaggattgcaattgctatagctatgatgctagaaagttggatgaa
gcaaaatatgtacacatgggtcatgaatccgctgtaatggatattgactactcaccaact
ggtcgagaatttgttactggatcttatgatagaactattagaatattccagtataatggt
ggtcgaagccgggaaatctatcatactaagagaatgcaaagggtgttctgtgtgaagttc
agctgtgatgccagttatgttatatctggaagtgatgataccaaccttaggctttggaag
gccaaagcatcagaacaattgggagttcttcacccaagggaaaggagaaagcatgagtat
catgaggctatcaagaatcgttacaagcaccttcctgagatcaagcgtatagtcaggcat
aggcacctgccaaaaccaatatacaaggcagctgccctaagacgcacaatgattgaagct
gagagaagaaaagcagaaagaaggaaagcacacagtgccccaggaagcatcataaatgag
ccattgcgtaaaaagagaatcatcaaagaagttgaatga
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