Mangifera indica (mango): 123220483
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Entry
123220483 CDS
T07684
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123220483
Membrane trafficking [BR:
minc04131
]
Protein recycling
Others
EARP complex
123220483
Endosome - Golgi transport
Tethering complex
GARP complex
123220483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG4_N
COG7
Vps54_N
LXG
MPH2
Motif
Other DBs
NCBI-GeneID:
123220483
NCBI-ProteinID:
XP_044498652
LinkDB
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Position
7:15961189..15978817
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AA seq
820 aa
AA seq
DB search
MDKSSALDYINQMFPTEASLSGVEPLMQKIHNEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATHAVEELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKSIKQILKSHVFSD
FSSLGTGKETEESNLLQQLSDACLVVDALEPSVREELVNNFCGRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRTNEEIWKIFPPSWHVPYRLCIQFCKKTRKQLEDILENLKEKPDV
GTLLLALQRTLEFEDELAVKFGGSSSSSREVGNDIEEIGRAESNSQKAADIRKKYEKRLA
AHQGSGTEDKDGNTDLSVPGAGFNFRGIISSCFEPHMTVYVELEEKTLMENLEKLVQDET
WDIEEASQNNVLNSSMQLFLIIKRSLKRCSALTKSKTLFNLFKVFQKILKAYATKLFARL
PKGGTGIVAAATGMDGQIKTSDKDEKLICYIVNSAEYCHKTSGELAESVSKIIDTQLANG
VDMSEVQDEFSAVITKALVTLVLGLETKFDAEMAVMTRVPWGSLESVGDQSEYVNGINMI
LTSSIPSLGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTI
LLDIPTLARQTTSAASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQR
ILELKGLKKADEQTILDDFNKHGPAITQPSIPASVTPVVPAAPVIANNASLGFIASREDV
LTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNT
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcaagtgcgctggattatatcaaccagatgttccctacagaggcatcttta
tctggcgttgagccgcttatgcaaaagatacataatgagattcgtcgtgtggatgcggga
atattagctgctgttcgtcaacagagtaactcaggaaccaaagctaaggaagatcttgct
gctgctacgcatgctgtggaggaactcatgtataagatccgtgaaataaaaaccaaagct
gagcaaagtgaaacaatggttcaagaaatatgccgtgacattaagaagttggacttcgca
aagaagcatataacaactacaattacagctcttcatcgtcttacgatgttagtgtccgct
gttgagcagcttcaggtaatggcttcaaaacggcaatataaggaagcagctgcacagctg
gaggctgtaaaccagttatgtagtcattttgaagcctacagggatattcctaagatcaca
gaacttagggagaagtttaagagtataaaacaaatacttaaatcacatgtgttttctgac
ttctcaagcttaggtaccggcaaagagacagaagaaagtaatctactgcagcagttatca
gatgcttgcttggttgttgatgccttggagccatctgtgagagaagagttggtaaataac
ttttgtggccgggagctaacctcatatgaacagatttttgaaggggctgaactagctaaa
ttggataaaactgaacgaagatatgcatggatcaaacgtcgtatgaggacaaatgaggaa
atatggaagattttccctccttcatggcatgttccttatcggctctgtattcagttctgt
aagaagacaaggaaacaactggaagacattctagaaaatctgaaagaaaaaccagatgtt
ggaacattattgttggcactacaacgaaccctagaatttgaagatgaattagctgtgaaa
tttggaggaagcagcagcagcagccgagaggttggtaatgacattgaagaaattggtaga
gcagaaagtaacagtcaaaaggcagcagatataagaaagaagtatgaaaaaaggcttgct
gctcatcagggaagtgggactgaagataaggatggaaatacagatttgtcggtgccaggg
gctgggttcaactttcgagggattatatcttcttgctttgaacctcacatgactgtttat
gtagaactagaagaaaaaacactaatggagaatctggagaagcttgttcaggatgaaacg
tgggatattgaagaagcaagtcagaataatgttctgaatagtagcatgcaactgtttctt
ataatcaagaggagcttaaagcggtgcagtgctcttactaaaagcaagacattattcaat
ttgttcaaggtatttcaaaaaattctcaaagcgtatgcaacaaagctttttgcaagactt
cctaagggtggcacaggaattgttgcagcagctactggtatggacggacagataaagaca
tctgacaaggatgaaaaattaatttgctatatagtgaactcagctgaatattgccacaaa
acgtctggagaactggctgaaagtgtgtccaaaataattgatactcagttagccaatggg
gttgatatgtctgaagttcaggatgaattttcagcagttataacaaaggcattagtaacc
ttagttcttggactggaaactaagtttgatgctgaaatggctgtgatgacacgtgtacca
tggggtagccttgagagtgtgggtgaccaatccgagtatgttaatggaataaatatgatc
cttaccagtagcattccctcacttggaagcctactttcacccatttactttcagttcttc
ttggataagctggcatcatctcttggtccacggttctatgccaatatcttcaaatgcaaa
cacatatcagaaactggagcccaacagatgctattggatacgcaagctgtaaaaaccatt
cttcttgacatacctacacttgctcgacagacaacaagtgctgctagctattcaaaattt
gtgagccgtgagatgagcaaagctgaagcacttttgaaggtcatactatccccagtagat
tctgtggcagatacatatcgtgcattgctaccagagggaacgccaatggaattccagcgt
attctagagcttaagggtcttaaaaaagctgatgagcagactatattggatgacttcaac
aaacatggaccagcaattacgcaaccctctattccagcatcagttaccccagtcgttcct
gcagctcccgtgattgcaaataatgcttcacttggttttattgcttcacgagaggatgtg
ctaaccagagcagctgcgcttgggcgaggggcagccacaactggattcaagaggttcctt
gctcttacagaagctgctaaagacaggaaggacgggcctttcaggaagctctttaacaca
tga
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