Mangifera indica (mango): 123220736
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Entry
123220736 CDS
T07684
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123220736
03036 Chromosome and associated proteins [BR:
minc03036
]
123220736
Transcription factors [BR:
minc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
123220736
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123220736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
ADD_ATRX
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
123220736
NCBI-ProteinID:
XP_044499234
LinkDB
All DBs
Position
7:14738773..14757346
Genome browser
AA seq
1496 aa
AA seq
DB search
MEDKHEEMEDIESASGDSFIADSDDDTPSISGQDDELHIEEHLTEVEIEELVAEFLEVES
KAAEAQEALEPESLAKVECEVREELAQTLHEIDLKVAVEDEMTAYREQWEAVLDELETES
AHLLEQLDGAGIELPSLYKWIENQAPNGCCTEAWKKRAHWVGSEVSGETNKLITDAEEYL
QTQRPVRRRHGKLLEEGASGFLQKKLVSDDSKEAETEITDLDWNSVNKIFSGDVSEECKF
GGKHWASVYFASTPQQAAAMGLKFPGVDEVEEIEDIDDDSNDPFVADAIANERELILSEE
QRKKFRKVKEEDDANIDRKLQLHLKRRRHRKRSKLGATQKEVFSVDGVIKSNSDEPQPFV
DSSNYLFSNKTHEDGEGMPDKSNEVTRQNLQTDVVESPRKLDNFDKARPKSNGTSSMSDS
TFSDSTELRGCKRSNETEEPNGDKKRIRPIIIDCNEEANVVNDKSVCTNLEHHSVWHENF
NVSVTADSLPSQSLKGKFFCTACQKVASEVHPHPLMKVIICKDCKSLLEQKMHVKDADCS
ECFCGWCGQSSDLISCKSCKVLFCTTCVKRNISEACLSEIQASSWHCCCCSPSLLKRLNL
EFEKAIGSGDLTVSSSESDSESSDADSNQTVGHKRKQKKKIRRILDDAELGEETKRKIAI
EKERQERLKSLQVQFSATSKMTSSASFEGDLPTAASAEVLGDAITGYIVNVVREKGEEAV
RIPPSISVKLKAHQVVGIRFMWENIVQSIKKVKSGDKGLGCILAHTMGLGKTFQVIAFLY
TAMRSIDLGLRTALIVTPVNVLHNWRQEFMKWRPTEVKPLRVFMLEDVSRDRRSELLAKW
RAKGGVFIIGYAAFRNLSFGKHVKDRQMGREICHALQEGPDILVCDEAHMIKNTRADTTQ
ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST
SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSQLQRKLYKRFLDV
HGFANDKVSNEKIRKSFFAGYQALAQIWNHPGILQLKKEDRGCLSREDAEDSSSDENLDY
NVVIGEKPRNTNDVLPGKNDDGFFQQDWWKDLLHEHTYKELDYSGKMVLLLDILTLCSDM
GDKALVFSQSIPTLDLIEMHLSKLPRSGKQGKFWKKGKDWYRLDGRTESSERQKLVERFN
EPFNKRVKCTLISTRAGSLGINLHAANRVIIVDGSWNPTCDLQAIFRAWRYGQKKPVFAY
RLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLPKLC
EENGQENSQTTTCKIGNSLKHKLPFSHGSCPSDKLMESLLGKHHPRWIANYHEHETLLQE
NEEERLSKEEQDLAWEVYWRSLEWEEVQRVPLDESAPERKPAPVSNVGPPKPETSNITAQ
PRGILRSRVVLRKCTNLSHLLTLRSQGTKAGCSTVCGECAQEIRWEDLNRDGKPAR
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaacatgaggaaatggaggatatcgagagtgcttccggtgactcttttatt
gctgactcagatgatgatacgccatctatttctggacaagatgatgaattgcacattgag
gaacatttgaccgaggtagaaatagaagagctggttgctgagtttttggaagttgagagt
aaggctgcagaggctcaggaagcacttgaacccgagtcccttgccaaagtggagtgtgag
gttagagaggagttggcacaaactcttcatgagattgatttgaaggtggctgttgaagat
gaaatgactgcttatagagagcaatgggaagcagtgctggatgaactcgaaacagagagt
gctcacttgttggaacaacttgatggggctggtattgagttaccaagcctatataagtgg
attgaaaatcaggctcctaatggttgctgcactgaagcttggaaaaaaagagcacactgg
gtaggatctgaggtctctggtgaaacgaacaagttaataactgatgccgaggagtatctt
caaacccaaaggcctgtaagaaggcgacatggtaaactgttggaggagggtgctagtgga
tttctgcagaaaaaacttgttagtgatgatagcaaggaggctgaaacagaaattacagac
cttgattggaactctgtcaacaaaatattttctggtgatgtttctgaggagtgtaaattt
ggtggcaagcattgggcttctgtgtactttgcaagtactccacagcaagctgctgcaatg
ggactcaaatttcctggagtcgatgaggtagaggagatcgaagacattgatgatgattcc
aatgatccatttgttgccgatgccatagctaatgaaagagaattgattctttctgaagag
caaagaaaaaaatttagaaaggtcaaagaggaagatgatgcaaatatcgatcgcaagctt
caactacatttgaaacgaaggcggcatcgaaaaagatcgaaactgggagctacccaaaaa
gaagttttttctgttgatggtgtgatcaaaagtaattcagatgaaccccagccttttgtt
gattcttctaattatctttttagcaataaaactcatgaagatggtgaaggcatgcctgac
aaaagcaatgaggttaccaggcaaaacttgcagactgatgtggttgaaagtcccagaaag
ttggataattttgacaaggcgaggccaaagagtaatggcacttcttcaatgtcagattct
actttttctgattccactgaattgagaggctgcaagcgttccaatgagactgaggagcca
aatggtgataaaaaacggattcggcctattatcatagattgtaatgaagaagctaatgtg
gtgaatgataaatctgtttgcaccaacttggaacatcattctgtctggcatgaaaatttt
aatgtttctgtcactgctgattctcttccttcccagagtttgaagggaaaattcttttgt
actgcctgtcagaaggtggcctccgaagttcacccacatccacttatgaaagtaatcatt
tgcaaggattgtaaaagcttgttggaacaaaagatgcatgtgaaggatgctgactgctct
gagtgtttctgtggatggtgtggacaaagcagtgatttaataagttgtaagtcatgcaaa
gtattgttctgtaccacttgtgtgaagaggaatattagtgaagcatgcttatctgagatc
caggcctcttcctggcattgttgttgctgctctccaagtctcttgaaaagactgaactta
gaatttgagaaagccattggctcaggagaccttacagtttctagctctgaaagtgattca
gagagttcagatgctgacagtaatcagacagtaggccacaagagaaagcaaaagaagaaa
atccggaggattctagatgatgctgaattaggagaagaaaccaaaagaaaaattgctatt
gaaaaggagcgccaagagcgtctaaaatctttgcaagtgcagttttctgccacatctaaa
atgacaagctctgcaagttttgaaggggacttgccgactgctgctagtgccgaagtgctt
ggtgatgccattactggttacatagtgaatgttgtgcgggaaaaaggtgaagaagctgtg
agaattccaccaagcatatcagtgaaattgaaggctcatcaggtagtagggataagattt
atgtgggaaaatattgtacagtcaatcaaaaaagtgaagtctggagataaagggcttggt
tgcattctggctcatacaatgggccttggtaaaacattccaggttatagccttcttgtac
acagcaatgagaagtattgacttgggtttaagaactgcacttattgtcacccctgtaaat
gtgcttcacaattggaggcaggaattcatgaagtggaggcctacagaggtcaaacctctc
cgtgtcttcatgttggaggatgtatcaagggatagaagatcagaattacttgccaagtgg
agggccaagggtggtgtatttataattggctatgctgctttccggaacttgtcctttgga
aagcatgtgaaggaccggcagatgggtagagaaatttgccatgccttacaggagggacct
gatatacttgtttgtgatgaggcccatatgattaagaacaccagggctgacacaactcaa
gccttgaaacaagtgaaatgccaaagaaggattgcattgactggatcacctcttcaaaac
aatctcatggaatattattgtatggttgattttgtaagggaaggtttccttggtagcagt
catgagtttaggaaccgcttccagaatcctatcgaaaatggtcagcatactaattcaaca
tctgaagatgttaaaattatgaatcagaggtctcatatcctctatgaacaactaaaagga
tttgtccagagaatggacatgaatgtggtgaagaaggacttgcctccaaaaactgtcttt
gtaataaccgtgaaactctctcaactgcagaggaaactatacaagagattccttgatgtg
catgggtttgcaaatgataaagtctctaatgaaaagataaggaagagcttttttgctggg
tatcaggccttagctcagatatggaaccatcctggtatcttacaattgaaaaaagaagat
aggggctgcttaagccgtgaggacgctgaggacagttccagcgacgaaaacctagattat
aatgtggtaataggagagaagccaaggaatacaaatgatgttctgccaggaaagaatgat
gatggcttttttcaacaggattggtggaaagatcttttgcatgaacatacttataaagag
cttgactacagtggcaaaatggttttgctgcttgatattctaaccttgtgttccgacatg
ggtgataaagcattggtttttagccagagtataccaacattggaccttatagagatgcat
ctttcaaaattgcctcgatcaggcaaacaagggaagttttggaaaaagggaaaggactgg
tataggctagatgggagaaccgagagttctgaaaggcaaaagttggtagagagatttaat
gagcccttcaataaaagggtgaagtgtacattgatttcaactagagctggatctctgggg
ataaatcttcatgctgccaaccgtgtaattattgttgatggttcctggaatccaacatgt
gatcttcaggccatatttcgtgcttggaggtatgggcaaaaaaagccagttttcgcttac
cgattgatggcacatggaactatggaggagaagatttataaacgtcaggtgacaaaggag
gggcttgccgcaagggtggttgatagacaacaagtacataggactatctccaaagaagaa
atgttacatctctttgaatttggtgacgatgaaaaccctgatcctctacccaaactgtgt
gaagaaaatggacaagaaaacagtcaaactactacatgcaaaataggaaattctctgaag
cataagttgcctttttctcatggaagctgcccttctgacaagttaatggaaagtttactt
ggcaagcatcatccaaggtggattgccaattaccatgaacatgagacccttctgcaagag
aatgaagaggaaaggctttcgaaggaggagcaagacttggcctgggaagtgtactggaga
tcacttgaatgggaggaagtgcagcgtgtaccacttgatgaatcagcaccagagcgaaag
cctgctcctgtgtcaaacgtgggtcctcccaaaccagagaccagcaacattacagcacaa
ccgagaggcattctgaggagtcgtgtggtgttgaggaaatgcacaaatctttctcatttg
cttactcttagaagtcagggcacaaaagctggttgcagcacagtatgtggagaatgtgct
caggaaatacggtgggaggacctaaatagggatggcaaaccagctaggtga
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