Mangifera indica (mango): 123220836
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Entry
123220836 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123220836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123220836
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123220836
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
HECT type E3
123220836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
123220836
NCBI-ProteinID:
XP_044499364
LinkDB
All DBs
Position
7:complement(20131772..20145475)
Genome browser
AA seq
1025 aa
AA seq
DB search
MFFSGDPTTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLYLRKQNQAAIKIQKCFRGRK
AMEIEHSKVREQFYSTFGRYLQNVDRNCFGPDSGFLRQLFFFFNARNANDITVLVETCRL
LQHFVQDSGNIVGLFAGMDYSSKCALIDYRVKKFAFVCIQAVHQNRNQLKDKLLVIPEDS
GTLLLESVVLLIDPKLPWVCKIVGYLLQRNAFTLLRDLVHTVKESTMTFALSSKNFSLEH
ALILMVPHIGRSPCICPDIDPRWSFSSQILTIPFLWHLFPHLKEVFATGGMSEHYVHQMA
LCVQNHANVLPNDNSIELPGYACLLGNILETAGVALSQPDCSFETAIDLAAVTTILMEAL
PSIKSSGKESSSVSEDDMISGDELTEIVLNRDLEQQITNAIDSRFLLQLTNVLFKGMLLV
SGSHDEGPDDKEVAAVGASCAFLHVTFNTLPLERIMTVLAYRTELVSLLWNYMKRCHQIK
KWPPLAYPSGDAPGWLVPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLKDIRHLIIILREA
LWQLLWVNPTSHTNVGRSVSNPSALKKLPYEVIQHRVSIVASEVLSQLLDWNNRQQFTPP
SDFHADGVNDIFISQAVTEGTRASEILKQAPFLIPFTSRVKIFHSQLAAVRQRHGSHGVF
TRNRFRIRRDRILEDAYSQMSALSEEDLRAAVRVTFVNELGVEEAGIDGGGIFKDFMENI
TRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGTLLGKAMFEGILVDIPFAT
FFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHFEGDISELELYFVIVNNEYGEQTEEELL
PGGRNIXVTNENVITFIHLISNHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQLL
VSGSLDSLDFDDLRQHTNYAGGYHGEHYVIEMFWQVLKSFSLENQKKFLKFVTGCSRGPL
LGFRYLEPLFCIQRAAGDASEEALDRLPTSATCMNLLKLPPYRSKEQMVTKLLYAINAEA
GFDLS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggcgatccaaccactcggaagcgagtcgatttaggaggtaggagttcc
aaggagagggatagacagaagcttcttgaacagacgaggttagagcgtaatcgtcgccta
tatttgcggaagcagaaccaggcggcgatcaaaattcagaaatgcttcagagggaggaaa
gctatggaaattgaacattccaaggtgcgagagcagttttattcaacctttgggcgttat
ctccagaatgtggacaggaattgttttggtccagattcagggttcctccgtcaattattc
tttttctttaatgcacgaaatgccaacgatattactgtccttgtggaaacatgtcggtta
cttcagcattttgttcaagatagtggtaatattgtgggcctctttgctggcatggactac
tcatccaagtgtgctttgatagattacagagttaagaaattcgcattcgtctgtattcag
gctgtacatcagaatagaaatcagctaaaggataaacttttagtgattcctgaagactct
ggcactctattgcttgaatcagtagttttgttgattgatcctaaacttccatgggtttgt
aagatagttggttatctcttgcaaaggaatgcgtttactctgcttagggatcttgttcat
acggtgaaggaaagtacaatgactttcgctctcagttctaaaaatttttcattggagcat
gcgctgatccttatggttcctcacattggtcgaagtccatgtatttgcccagatattgat
ccacggtggagtttctcttcgcagattctcacgataccattcttatggcatcttttcccc
cacctaaaagaggtttttgcaactggtggaatgagtgaacattatgtacatcagatggca
ttgtgtgtgcaaaatcatgctaatgtacttccaaatgataattcaattgagttacctgga
tatgcgtgtcttcttggcaacatattggaaactgcaggagttgctttatctcagcctgac
tgttcattcgaaacggcaattgatcttgctgctgttacaacaatcttgatggaggcactt
ccttctataaagtcatcgggcaaagagagttcctcagtcagtgaggatgatatgatttct
ggtgatgaattgacggaaatagttttgaatagggatttggagcagcagataaccaatgcc
atagattcacgttttcttttgcaattgacaaatgtattattcaaagggatgctgttggta
tctggttcacatgatgaaggaccagatgataaagaggtggctgctgttggtgcttcttgt
gcatttttgcatgtcaccttcaacactttacctttggagcgaattatgactgtcctggct
tacagaactgaacttgtttctttactttggaattatatgaagcggtgtcatcagataaaa
aagtggccacccttggcgtatccctcaggagatgcacctggttggctagtacctctggct
gttttttgtccagtgtacaagcacatgctgatgatagttgataatgaggagttctatgag
caggagaaaccattgtcattgaaggatatcagacatctaattatcattttgagagaggcc
ttatggcagctcttatgggtgaatcctacatcgcacactaatgtaggaagatctgtctcc
aacccctctgctcttaaaaagttaccatatgaagtcattcaacacagggtcagcattgtg
gcctctgaggtcctttcacagttgctagattggaacaatagacaacagtttacacctcca
agtgacttccatgctgatggtgtcaatgacattttcatctctcaggctgtaacagaaggt
accagagcttctgaaatattgaagcaagctcctttcttgattccatttacaagcagggtc
aaaatatttcattcccagttagcagctgttaggcaaaggcatggctctcatggtgttttt
acaagaaatcgcttcagaatccgcagggatcgtattctggaagatgcttatagtcagatg
agtgcattgtctgaagaggatctccgagcagcagttcgtgtaacatttgttaatgaactt
ggtgttgaggaggctggtattgatggcggtggaattttcaaagactttatggagaatata
actcgtgcagcttttgatgtgcagtatgggttattcaaggaaacagctgatcacctactc
tacccaaatcctggatcaggaatgatacatgagcagcacctccagttttttcattttctt
ggaactcttcttgggaaggccatgtttgaagggatccttgttgatataccatttgcaact
ttcttcttgagcaagttaaaacaaaagtacaactatttgaatgacttgccctcattggac
cctgaattgtatcgccaccttattttcttgaagcattttgaaggtgacatttcagagtta
gaactctactttgttattgtaaataatgaatatggagagcaaacagaggaagagctactt
ccaggagggagaaatatcnatgttactaatgagaatgtgattactttcattcatctcatc
tccaatcaccgcttgaattttcagatacgtcaacagagttctcatttcttgaggggtttc
cagcagcttatacagaaagattggattgatatgtttaatgagcacgaacttcagcttcta
gtatcaggttcacttgacagcttggattttgatgacctaagacagcacaccaattatgct
ggtggctatcatggtgaacactatgtcattgagatgttttggcaagttctcaaaagcttt
tcattggaaaaccagaagaaatttttgaagtttgtgactggctgttctcgaggaccgctt
ctgggatttaggtatcttgaacctttattttgcatacaaagagctgcaggtgatgcttct
gaagaagctcttgaccgcttaccaacatcagctacctgtatgaatcttctaaagcttccc
ccatacaggagcaaagagcaaatggtgacaaaactactatatgccataaatgcagaagct
ggctttgatttgagctga
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