Mangifera indica (mango): 123220951
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Entry
123220951 CDS
T07684
Name
(RefSeq) F-box/LRR-repeat protein 4 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123220951
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123220951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_At1g61320_AtMIF1
F-box_5
F-box
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
123220951
NCBI-ProteinID:
XP_044499513
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Position
7:complement(17481123..17486020)
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AA seq
623 aa
AA seq
DB search
MRRYDRINACLPDELILEIFRHLDLKVSRDACSLVCKRWLTLERLSRTTLRIGASSSPDL
FVKLLSRRFANVKNIHIDERLSISHPVQPDFVLFAVDVKMKFLLQGRRRGSDQLALSSPK
LQFVSETSGSEEGQVEPYCLSDAGLTVLAEGFSKLEKLSLIWCSNVSCVGLMSLAYNCVY
LKSLDLQGCYIGDQGLSAVGKCCKQLEDLNLRFCEGLTDTGLADLALGCGKSLKSIGVAA
CVKITDVSLEAVGSHCKSLETLSLDSEFIHNKGVLVVARGCPHLKVLKLQCINVTDEALI
AVGTSCFSLELLALYSFQQFTDMGLHAIGNGCKKLKNLTLSDCYFLSDKGLEAIAAGCKE
LTHLEVNGCHNIGTVGLESIGQSCQSLTELALLYCQRIGNSALLEVGRGCKFLQALHLVD
CSNIGDEAIGSIARGCQNLKKLHIRRCYKIGNSGIVAVGENCKFLTELSLRFCDRVGDEA
LISIGKGCSLKHLNVSGCHQIGDAGIIAIARGCPELNYLDVSVLQNLGDMAMAELGEGCP
LLKDIVLSHCRQITDIGLAHLVRNCTMLESCHMVYCPGITAVGVATVVSSCVNIKKVMVE
KRKVSQRTQRRAGSVISYFCVDL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggtatgatcggatcaacgcgtgtctgccggacgagttgattctcgagatcttc
cggcacctcgatttaaaggtcagccgagatgcctgctcactcgtctgcaagcgctggctc
acgctcgagcgcctcagccgaaccactctccgcatcggcgcctccagtagccccgacctc
ttcgtcaagttgctttctcgacgcttcgccaacgttaagaacattcatatagatgaacgc
ctttccatttctcatcctgttcaaccagattttgttttgtttgcggttgatgtaaagatg
aagtttcttctacagggaagaaggcgtggcagtgaccaattggctctttcatcgcctaag
ctgcaatttgttagtgaaacaagtggatccgaggaaggtcaggttgagccatattgttta
tcagatgctgggttgaccgtacttgctgaaggcttttcgaagcttgagaaattgagctta
atctggtgctctaacgtatcctgtgtgggtttaatgtcccttgcttacaactgtgtatac
ttgaaatctttggatttacagggttgttacattggagatcaagggctatctgctgttggg
aaatgttgcaagcaacttgaagatctgaatttgcgtttttgtgaaggtttgactgacacg
ggtttagctgacttggctcttggatgtggcaaatctttaaaatctattggtgttgcggct
tgtgttaaaattactgatgtgtcattagaagctgtgggatctcactgtaaatctcttgaa
acattgtcgttggattcagaattcatccacaataaaggggtgcttgttgtggcccgagga
tgtcctcatctaaaagttttgaagcttcagtgtattaacgttacagatgaggctttgata
gctgtgggaacttcttgtttttctttggagttattggctctatacagtttccagcaattt
acagacatgggtttgcatgctataggaaatgggtgtaagaagttaaaaaatctcactctt
agtgattgctatttcctgagtgacaagggtttggaagctatagctgcaggctgcaaagaa
cttacacatcttgaagtcaatggttgccacaatattggaactgtgggactggagtccatt
ggacaatcttgccagagcctcactgagttagctttattatattgccagagaattggtaat
tctgctcttcttgaagttggaaggggctgtaagttcttgcaagctcttcacttggtcgat
tgctctaacattggagatgaggctattggcagtatagctagaggctgccagaatttaaag
aaacttcacatccgtcgatgctataagattgggaacagtggaattgtagctgtcggtgag
aattgcaagtttctgacggagcttagccttcgattttgtgacagagtgggggatgaagct
cttatttccataggtaagggctgctccttgaaacatcttaatgtcagtggttgccaccaa
attggtgatgctggaattatagccattgcaagagggtgccctgaactgaattacctagat
gtaagcgttctccagaacttgggagatatggcaatggcagagttaggtgaaggttgtcca
ttactgaaggatatagtgttatcacactgccgtcaaatcacagacattggtttagcccat
cttgttagaaactgcacaatgctggagtcgtgtcacatggtgtattgcccagggattact
gcagttggagttgccactgtagtttccagttgtgtgaacataaaaaaggtgatggtcgag
aagcggaaggtgagccagaggacccaaaggagggcaggttctgttatctcgtacttctgt
gtggacctttag
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