Mangifera indica (mango): 123221106
Help
Entry
123221106 CDS
T07684
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123221106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123221106
03016 Transfer RNA biogenesis [BR:
minc03016
]
123221106
Enzymes [BR:
minc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
123221106
Messenger RNA biogenesis [BR:
minc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
123221106
Transfer RNA biogenesis [BR:
minc03016
]
Prokaryotic type
tRNA degradation factors
123221106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
123221106
NCBI-ProteinID:
XP_044499741
LinkDB
All DBs
Position
7:complement(15642449..15659274)
Genome browser
AA seq
961 aa
AA seq
DB search
MLANSSGLPARPYYPHSSHFSPSSRCKLSLSPNCSCFANSTKSSKFISLSLLLSAKNYPR
KFSVKALAQEPRVSESETVATDAPPSFPQPVSVKIPYGDRHILVETGKMGRQASAAVTVT
DGETIVFTSVCLADSPSEPSDFFPLNVNYQERFSAAGRTSGGFFKREGRTKDHEVLVCRL
IDRPLRPTMLKGFYHETQILSWVLSYDGLHSPDALSITAAGIAVALSEVPQSKIIVGVRV
GLVGDKFVVNPTTKEMEDSDLDLVLAGSDNAILMIEGYCNFLSEEKLIQAVKVGQEAVRT
ICNEVKALVKMCGKPKMLDTIKLPPPELYKHVEEIVGQDLVKMLQIRNKIPRRKALTTLE
EKVLTILTETGYVSKDETVGTTELVPDLFEEEDEDEEVVLDGEVDEGDVHIRPIPRKPLP
LLYSEVDVKLVFKDVTSKFLRRRIVEGGKRSDGRYADGIRPINSRCGLLPRAHGSALFTR
GETQALAVVTLGDKQMAQRIDNLVGDGDVKSFYLQYSFPPSSVGEVGRIGAPSRREIGHG
TLAERALEPILPSEDKFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKCSIAGI
AMGMVLDTEEFGGDGAPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPV
MEKALLQAKDGRRQILAEMMKCLPPPTNRLSKYAPLIHIMKVSPEKINLIIGSGGKKVKS
IIEETGVEAIDTEDDGTVKITARDLSCLEKAKTIISNLTFVPTVGDIYRNCKIKSIAPYG
VFVEIAPGREGLCHISELSSNWLSKTEDAVKVGDQIDVKLIEVNDKGQLRLSVKALLPVT
NAENHPAKSDTADSTKDVAASSKTDKSMAKKSVYLSKDGAVEEKTRHPKDVSSAKSSTAD
DNLLPQRKVFKRIGRTSKEVSTINKVRTKKSSGKEVSSISNKDGSSLVDGGAKVGCRAAR
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaaactctagcggcctccccgcgaggccctactatccacactcctctcatttc
tcaccgtcctctcgctgcaagctttctctgtctccaaattgctcttgcttcgccaattcc
actaagtcttccaaattcatctcgttatctctgcttttgtctgcgaaaaactaccctcgg
aagtttagtgttaaagctttggcgcaagaacctcgggtttcagagtcggagaccgtcgcc
acggatgcgccgcccagttttcctcaaccggtttctgtcaaaattccatacggtgacaga
catattttggttgagacgggtaaaatggggagacaagctagtgctgctgttacagtaaca
gatggtgaaactattgtcttcacttctgtttgtttggcggatagcccaagtgagccttct
gatttttttcctctcaatgtaaattatcaagagcgtttttctgcagctggtcggaccagt
ggaggcttttttaaacgagaagggaggacaaaggatcatgaggtccttgtttgtagattg
attgatcggcccctacgcccaactatgcttaagggcttttaccatgaaactcaaatacta
tcttgggttttgagctatgatggtctgcattcccctgacgctttgtcaattacagcagct
ggaatagcagttgctctgtcagaagtgccacaatccaaaataattgtgggagttcgagtt
ggtctagttggtgacaagtttgttgtgaatccaacaaccaaggagatggaagactcagat
ttggacttggttttggctggctctgataatgcaatattgatgatagagggttactgtaat
ttcctttcagaagaaaagttgattcaagcggtgaaagtcgggcaggaagcagtacggact
atttgtaatgaggtgaaagctctagttaagatgtgtggcaaaccaaaaatgcttgacact
ataaaattaccacctccagagctatataagcacgttgaagaaattgttggtcaggacttg
gtgaaaatgctacaaatcaggaacaaaataccacgaagaaaggctctcacaacattggaa
gaaaaagttctgacaatacttacggagacaggatatgtcagtaaagatgagactgttgga
actactgaactagtaccagatttgtttgaggaagaagatgaggatgaggaagttgttctg
gatggtgaggtagatgaaggcgatgttcacataaggccaattccacggaaaccccttccc
ttgctgtattctgaggtagatgtgaagctggtgtttaaagatgttacatccaaattcctg
cggagacgcattgtggagggaggaaaaaggagtgatggacgatatgcagatggaatacgc
ccaatcaactcaagatgtggattacttcctagggcacatggaagtgctcttttcacccgt
ggtgaaacacaggcgttggctgtggttacacttggggataagcaaatggcacaaaggata
gacaatcttgtgggtgacggtgatgttaagagcttctaccttcagtactcatttcctcca
tcatctgttggtgaggttgggaggattggagcacctagtagaagagaaattggtcatgga
acattggctgagcgagctcttgaacctatattgccttctgaagataaatttccatatact
atacgtgtagagagtaccatcactgaaagcaatggctcctctagcatggcatctgtttgt
ggaggttgcttggcattgcaagatgctggtgttccaataaagtgctccattgctgggata
gcaatgggtatggtattggacactgaagaatttgggggagatggggcaccactaattctc
tctgacataactggctctgaagatgcatctggagatatggattttaaggttgccggaaat
gaagatggtataaccgcatttcagatggacataaaggtgggaggaattactttacctgtt
atggaaaaggcactcctacaggctaaggatggccgcagacaaattcttgctgaaatgatg
aagtgcttacctccccctacaaataggctttctaagtatgctccactgattcacattatg
aaggttagtccagagaaaattaaccttatcattggctctggtggaaagaaggtgaagagt
attattgaagaaactggagtggaggctattgacacagaagatgatggaacagtaaaaatt
actgcaagggatttatcatgtctagagaaagccaaaaccattattagtaacttgacgttt
gtcccaactgttggtgatatttataggaattgtaagatcaaatcaattgctccttatgga
gtttttgttgagatagcccctgggcgtgagggactttgccatattagtgagctaagctca
aactggctttcgaagacggaagatgctgttaaggttggagaccaaattgatgttaagctt
atcgaggtaaatgataaaggacaacttcgccttagcgttaaagcactacttccagtgaca
aatgctgagaatcatcctgcaaagtcagatacagctgattccaccaaagatgttgcagct
tcaagtaaaactgataaaagtatggcaaaaaaatctgtgtatttatcaaaggatggtgct
gttgaagagaagactcggcaccccaaggatgtgagctccgcaaaaagcagtactgcagac
gataatctactcccacagagaaaggtcttcaagagaattggaaggacttcaaaagaggta
tccactattaacaaagtaaggacaaagaagagcagtggtaaagaagtcagcagtatctct
aacaaagatggaagcagcttagttgatggaggcgcgaaagttggatgcagggctgcacga
tcatga
DBGET
integrated database retrieval system
